Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4976g00005 ATGTACAGAAGGGTGACCTGCCTCTTCGCAGGCATTTCTATAGCCTTACTAGTTCTCTTCACATTGGTCTTCACATTATGCTGGGGACACAAGCAAAGATCACTAAAGCGACTTAGAAGAAAGTATTTTGAGCAAAATGGAGGAAATTATATGCTGCAGCAAATTTATCATCAACAAGGACATACTGATAGGACCAAGATTTTTTCTGAAGACGAGCTCAAAATTGCAACAGACAACTTCGACGAAAGCAGAATCCTTGGTCATGGAGGGCAAGGTACGGTTTACAAGGGTATATTGTCAGATAACAGGCATGTGGCCATCAAAAAGTCCAGAATTAGTGGAAATCATAGGCAAATAAAGGATTTTATCAATGAAGTGGCTGTACTTTCCCAAATCAACCATAGTAATGTGGTTAAACTTTTCGGATGTTGTCTTGAAACTGAAGTTCCTTTGTTAGTATATGAGTTTGTAGACAATGGCACCCTTCTTGAACATATAGACCCACTCAAAAACAAGAACTCTCTTTCATGGGAGACCCGATTAAGGATTGCTGCAGAAACAGCTGGGGCCATTTCATATTTACACTCTGCTGCTTCTATTCCAATTATTCATCGCGATATTAAATCTGCCAACATACTATTCGATCACAATCATAGGGCAAAAGTTTCTGACTTTGGAGCCTCAAGACTTGTTCCTCTTGATGAAACCCAAATTACAACTGTGGTTCAAGGGACATTAGGGTATTTGGATCCAGAGTACCTCCTCACAGGTCAATTGAACGAGAAAAGTGATGTCTATAGCTTTGGAGTTGTGCTTGTGGAGCTAATCACTGGAAATAAAGCAGTTGAATTCAATAGGCCAGAAGAGAGAAATTTAGCTATGCACTTTACATCTTTGATGAAGGAAGACAACTTGTGGAAGATTCTCGACAAGCGAGTGTTGGATGTGAAGAACGCAGAGCAACTAAAGGAAGTTGCTTTCTTGGCAAGGAGGTGCATCAGAGTTAATGGAGAGGAAAGACCGACTATGAAAGAAGTAGCAATGGAATTAGAGGGTCTAATTGCTGTGAAAAAGCATCCTTGGGTAAAGGGAGAGGATATGATGTCTGAAGTATGTGAATATTTGCTTGGTCACGTGGCTAGCAGGTATGGGAATGCTAGTGCTGGCACTCCAGTTGAAAATAATGGTGGATATGGGAATGCTAGTGCCAACACTTTAGCTGGCTATGATAGCATACAGAAGCAAATGGAATTTGAGATTGCAGATGGGCGATGA 1275 0.4086 MYRRVTCLFAGISIALLVLFTLVFTLCWGHKQRSLKRLRRKYFEQNGGNYMLQQIYHQQGHTDRTKIFSEDELKIATDNFDESRILGHGGQGTVYKGILSDNRHVAIKKSRISGNHRQIKDFINEVAVLSQINHSNVVKLFGCCLETEVPLLVYEFVDNGTLLEHIDPLKNKNSLSWETRLRIAAETAGAISYLHSAASIPIIHRDIKSANILFDHNHRAKVSDFGASRLVPLDETQITTVVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLVELITGNKAVEFNRPEERNLAMHFTSLMKEDNLWKILDKRVLDVKNAEQLKEVAFLARRCIRVNGEERPTMKEVAMELEGLIAVKKHPWVKGEDMMSEVCEYLLGHVASRYGNASAGTPVENNGGYGNASANTLAGYDSIQKQMEFEIADGR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4976g00005 424 Pfam Protein kinase domain 81 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00005 424 FunFam Wall-associated receptor kinase 2 50 156 - -
Pral4976g00005 424 CDD STKc_IRAK 86 353 - -
Pral4976g00005 424 Gene3D Phosphorylase Kinase; domain 1 51 156 - -
Pral4976g00005 424 FunFam Wall-associated receptor kinase 2 157 373 - -
Pral4976g00005 424 ProSiteProfiles Protein kinase domain profile. 80 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00005 424 SMART serkin_6 80 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00005 424 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 353 IPR045274 GO:0007166
Pral4976g00005 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Pral4976g00005 424 Gene3D Transferase(Phosphotransferase) domain 1 157 371 - -
Pral4976g00005 424 SUPERFAMILY Protein kinase-like (PK-like) 63 364 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4976g00005 Pral-Chr4976 52594 54393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4976g00005 2 424 Receptor kinase-like Gene Family AT1G21230 51.408 2.55e-138 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral4976g00005 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4976g00005 - - pcin:129293718 558.91