Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4976g00004 ATGCTTAGAGATATTAATGAGTGCGACGTAAAGAATCGCTGCAGCAGAAGATGCCATAATGTGGAAGGAAATTATACTTGTTCGTGTCCGCCGGGTTATAGAGGCGACGGCTATATCGACGGATCAGGCTGCAAATTCCCTCTCATGCAAATTTCATTGGGCATTTCTTTAGCCTTACTAGTTCTATTCACATTTGTCTTCATATTATGCTGGGGACACAAGCAAAGATCACTAAAGCGACTTAGAAGAATGTATTTTGAGCAAAATGGAGGAAATTATATGCTGCAGCAAATTTATCGACAACAAGGACATACTGATAGGACCAAGATTTTTTCCGAAGAGGAGCTCAAAATTGCAACAAACAACTTCGATGAAAGCAGAATCCTTGGTCGTGGAGGCCAAGGTACGGTTTACAAGGGTATATTGTCAGATAACAGGCATGTTGCCATAAAGAAGTCCAGAATTAGTGGAAATCACAGGCAAATAAAGGATTTTATCAATGAAGTGGCTGTACTTTCTCAAATCAACCATAGGAATGTGGTTAAACTTTTCGGATGTTGTCTTGAAACTGAAGTTCCTTTGTTAGTGTATGAGTTTGTAGACAATGGCACCCTTCTTGAACATATAGACCCACTAAAAAACAAGAACTCTCTTTCATGGGAGACCCGATTAAGGATTGCTGCAGAAACAGCTGGGGCCATCTCATATTTACATTATGCTGCTTCTATTCCAATTATTCATCGTGATATTAAATCTACCAACATACTATTAGATCATAATCATAGAGCGAAAGTTTCTGACTTTGGAGCCTCAAAACTTGTTCCTCTAGATGAAACTCAAATTACTACAGTGGTTCAAGGGACATTAGGGTATTTGGATCCGGAGTACCTCTTCACAGGTCAGCTGAATGAGAAAAGTGATGTCTATAGCTTTGGAGTTGTGCTTGTGGAGCTAATCACCGGAAATAAAGCAGTTGAATTCAATAGGCCAGAAGAGAGAAATTTAGCTATGCACTTTGCATCTTTGATGAAGGAAGACAACTTGCGGAAGATTCTTGACAAGCGAGTGTTGGATGTGAAGAACGCAGGGCAACTAAAGGAAGTTGCTTTCTTGGCAAGGAGGTGCATTAGAGTTAATGGAGAGGAAAGACCGACTATGAAAGAAGTAGCCATGGAATTAGAGGGTCTAATTGCCGTGAAAAAGCATCCTTGGGTAAAGGGAGAGGATATGATGTCTGAAGTATGTGAATATTTGCTTGGTCACGTGGCTAGCAGGTATGGGAATGCTCCTGCTGGCACTTCAGCTGGCTATAATGGTGGCTATGGGAATGCTAGTGCCGACACTTTAGCTGGCTATGATAGCATACAGAAACAAATGGAATTTGAGATTGCAGATGGGCGATGA 1404 0.4103 MLRDINECDVKNRCSRRCHNVEGNYTCSCPPGYRGDGYIDGSGCKFPLMQISLGISLALLVLFTFVFILCWGHKQRSLKRLRRMYFEQNGGNYMLQQIYRQQGHTDRTKIFSEEELKIATNNFDESRILGRGGQGTVYKGILSDNRHVAIKKSRISGNHRQIKDFINEVAVLSQINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLEHIDPLKNKNSLSWETRLRIAAETAGAISYLHYAASIPIIHRDIKSTNILLDHNHRAKVSDFGASKLVPLDETQITTVVQGTLGYLDPEYLFTGQLNEKSDVYSFGVVLVELITGNKAVEFNRPEERNLAMHFASLMKEDNLRKILDKRVLDVKNAGQLKEVAFLARRCIRVNGEERPTMKEVAMELEGLIAVKKHPWVKGEDMMSEVCEYLLGHVASRYGNAPAGTSAGYNGGYGNASADTLAGYDSIQKQMEFEIADGR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4976g00004 467 FunFam Wall-associated receptor kinase 2 93 199 - -
Pral4976g00004 467 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 396 IPR045274 GO:0007166
Pral4976g00004 467 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 18 29 IPR000152 -
Pral4976g00004 467 ProSiteProfiles Protein kinase domain profile. 123 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00004 467 Gene3D Phosphorylase Kinase; domain 1 94 199 - -
Pral4976g00004 467 SMART egfca_6 4 45 IPR001881 GO:0005509
Pral4976g00004 467 CDD STKc_IRAK 129 396 - -
Pral4976g00004 467 SUPERFAMILY EGF/Laminin 4 37 - -
Pral4976g00004 467 SUPERFAMILY Protein kinase-like (PK-like) 106 407 IPR011009 -
Pral4976g00004 467 SMART egf_5 7 45 IPR000742 -
Pral4976g00004 467 Gene3D Transferase(Phosphotransferase) domain 1 200 414 - -
Pral4976g00004 467 Gene3D Laminin 4 46 - -
Pral4976g00004 467 FunFam Wall-associated receptor kinase 2 200 416 - -
Pral4976g00004 467 ProSitePatterns Calcium-binding EGF-like domain signature. 4 27 IPR018097 GO:0005509
Pral4976g00004 467 Pfam Protein kinase domain 124 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00004 467 CDD EGF_CA 4 36 - -
Pral4976g00004 467 ProSiteProfiles EGF-like domain profile. 4 36 IPR000742 -
Pral4976g00004 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Pral4976g00004 467 FunFam Fibrillin 2 1 40 - -
Pral4976g00004 467 SMART serkin_6 123 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4976g00004 Pral-Chr4976 38726 41036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4976g00004 3 467 Receptor kinase-like Gene Family AT1G21230 48.125 1.91e-140 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral4976g00004 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4976g00004 - - pcin:129293718 608.601