Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4976g00003 ATGGGGTACTGCTGCGTTTGTAAAGAAGGTTTCAGAGGCAACCCCTACCTCTCTCACCCCGATCTTGGCTGCAAAGATATTAACGAGTGCGATGACGGCAAGCATCGCTGTAGCAGGAGATGCCACAATGTGGAAGGAAATTATACGTGTTCTTGTCCGCCGGGTTACAGAGGCGACGGCTATATCGACGGATCAGGCTGCAAATTCCCTTTCATGGAAATCTCATTGGGCATTTCTGTTGCCTTCCTTTTTGTCTTCACATTTGTCTCCACATTATGCTGGGGACACAAGCAAAGATCACTAAAACAACTTAGAAAGAAGTATTTTGAGCAAAATGGAGGGAATTACATGCTGCAGCAAATGTATCAACAACAAGGACATACTGATCGAGCCAAGATTTTTTCTGAAGATGAGCTTAGAACTGCTACAAACAACTTTGATGAAAATAGAATTCTTGGCCGTGGAGGACAAGGCACAGTTTATGAGGGTATATTACCAGATAACACGCATGTTGCCATCAAAAAGTCCAGAATAGGTGGGGATCCTAGACAGATTAAGGATTTTATCAATGAAGTGGCTGTACTTTCCCAAATTAACCATAGGAATGTAGTCAAACTTTTTGGGTGTTGTCTTGAAACGGAAGTTCCTTTGTTAGTTTATGAGTATGTGGACAATGGCACCCTTCTTGAACATATAGACCCACTAAAGAATGAGCATCCTCTTTCATGGGAGATCAGATTAAGGATTGCTGTAGAAACAGCCGAAGCCATCTCATATTTACACTCTGCAGCTGCTATTCCAATTATTCATCGCGATATTAAATCTGCCAACATTCTATTAGATCACAATCATAGGGCAAAAGTTTCTGACTTTGGAGCCTCAAGACTTGTTCCTCTTGATGAAACTCAAGTTACTACTGTAGTCCAAGGAACATTAGGATATTTGGATCCAGAATACCTCCTTACAGGTCAATTGAATGAGAAAAGTGATGTTTATAGCTTTGGGGTTGTGCTTGTGGAGCTAGTCACCGGAAATAAAGCAGTTGACTTCAACAAGCCAGAACAAAGAAATTTGGCTATGCACTTTGCATCTTCACTGAAAGAAGACAACTTGTGGGAAATTCTTGACAAGCGAGTGTTACATCAAAAGAATGAAGAGCAGCTAAAAGAAGTTGCTTTCTTGGCAAGGAAATGCATCAGGGTTAATGGAGAGGAAAGGCCGACTATGAAAGAAGTAGCAATGGAGCTAGAGGGTCTAATTTCTATGAAAAAACATCCTTGGGGAAAGCGAGAGGATATGATGTCTGAGGAATGTGAATACTTGCTTGGTCATGTAGCTGATGGATACGGAAATGCTAGTGCTAGCACTTCAACTGTCTATGATAGCATACAGAGAGAAGTAGCATTTGAGATTGAAGATGGGCGATGA 1428 0.4146 MGYCCVCKEGFRGNPYLSHPDLGCKDINECDDGKHRCSRRCHNVEGNYTCSCPPGYRGDGYIDGSGCKFPFMEISLGISVAFLFVFTFVSTLCWGHKQRSLKQLRKKYFEQNGGNYMLQQMYQQQGHTDRAKIFSEDELRTATNNFDENRILGRGGQGTVYEGILPDNTHVAIKKSRIGGDPRQIKDFINEVAVLSQINHRNVVKLFGCCLETEVPLLVYEYVDNGTLLEHIDPLKNEHPLSWEIRLRIAVETAEAISYLHSAAAIPIIHRDIKSANILLDHNHRAKVSDFGASRLVPLDETQVTTVVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLVELVTGNKAVDFNKPEQRNLAMHFASSLKEDNLWEILDKRVLHQKNEEQLKEVAFLARKCIRVNGEERPTMKEVAMELEGLISMKKHPWGKREDMMSEECEYLLGHVADGYGNASASTSTVYDSIQREVAFEIEDGR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4976g00003 475 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 41 52 IPR000152 -
Pral4976g00003 475 ProSiteProfiles EGF-like domain profile. 26 59 IPR000742 -
Pral4976g00003 475 CDD EGF_CA 26 59 - -
Pral4976g00003 475 FunFam Fibrillin 2 21 63 - -
Pral4976g00003 475 SMART egf_5 29 68 IPR000742 -
Pral4976g00003 475 FunFam Wall-associated receptor kinase 2 116 222 - -
Pral4976g00003 475 SMART serkin_6 146 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00003 475 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 34 420 IPR045274 GO:0007166
Pral4976g00003 475 Pfam Protein kinase domain 147 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00003 475 SUPERFAMILY EGF/Laminin 19 58 - -
Pral4976g00003 475 Pfam Calcium-binding EGF domain 26 57 IPR001881 GO:0005509
Pral4976g00003 475 ProSitePatterns Calcium-binding EGF-like domain signature. 26 50 IPR018097 GO:0005509
Pral4976g00003 475 Gene3D Transferase(Phosphotransferase) domain 1 223 439 - -
Pral4976g00003 475 FunFam Wall-associated receptor kinase 2 223 439 - -
Pral4976g00003 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Pral4976g00003 475 Gene3D Laminin 1 61 - -
Pral4976g00003 475 Gene3D Phosphorylase Kinase; domain 1 116 222 - -
Pral4976g00003 475 ProSiteProfiles Protein kinase domain profile. 146 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00003 475 SUPERFAMILY Protein kinase-like (PK-like) 129 416 IPR011009 -
Pral4976g00003 475 CDD STKc_IRAK 152 419 - -
Pral4976g00003 475 SMART egfca_6 26 68 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4976g00003 Pral-Chr4976 38447 49477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4976g00003 2 475 Receptor kinase-like Gene Family AT1G21250 51.230 4.31e-158 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral4976g00003 Pkinase 7.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4976g00003 - - pcin:129293718 647.506