Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4976g00003 | ATGGGGTACTGCTGCGTTTGTAAAGAAGGTTTCAGAGGCAACCCCTACCTCTCTCACCCCGATCTTGGCTGCAAAGATATTAACGAGTGCGATGACGGCAAGCATCGCTGTAGCAGGAGATGCCACAATGTGGAAGGAAATTATACGTGTTCTTGTCCGCCGGGTTACAGAGGCGACGGCTATATCGACGGATCAGGCTGCAAATTCCCTTTCATGGAAATCTCATTGGGCATTTCTGTTGCCTTCCTTTTTGTCTTCACATTTGTCTCCACATTATGCTGGGGACACAAGCAAAGATCACTAAAACAACTTAGAAAGAAGTATTTTGAGCAAAATGGAGGGAATTACATGCTGCAGCAAATGTATCAACAACAAGGACATACTGATCGAGCCAAGATTTTTTCTGAAGATGAGCTTAGAACTGCTACAAACAACTTTGATGAAAATAGAATTCTTGGCCGTGGAGGACAAGGCACAGTTTATGAGGGTATATTACCAGATAACACGCATGTTGCCATCAAAAAGTCCAGAATAGGTGGGGATCCTAGACAGATTAAGGATTTTATCAATGAAGTGGCTGTACTTTCCCAAATTAACCATAGGAATGTAGTCAAACTTTTTGGGTGTTGTCTTGAAACGGAAGTTCCTTTGTTAGTTTATGAGTATGTGGACAATGGCACCCTTCTTGAACATATAGACCCACTAAAGAATGAGCATCCTCTTTCATGGGAGATCAGATTAAGGATTGCTGTAGAAACAGCCGAAGCCATCTCATATTTACACTCTGCAGCTGCTATTCCAATTATTCATCGCGATATTAAATCTGCCAACATTCTATTAGATCACAATCATAGGGCAAAAGTTTCTGACTTTGGAGCCTCAAGACTTGTTCCTCTTGATGAAACTCAAGTTACTACTGTAGTCCAAGGAACATTAGGATATTTGGATCCAGAATACCTCCTTACAGGTCAATTGAATGAGAAAAGTGATGTTTATAGCTTTGGGGTTGTGCTTGTGGAGCTAGTCACCGGAAATAAAGCAGTTGACTTCAACAAGCCAGAACAAAGAAATTTGGCTATGCACTTTGCATCTTCACTGAAAGAAGACAACTTGTGGGAAATTCTTGACAAGCGAGTGTTACATCAAAAGAATGAAGAGCAGCTAAAAGAAGTTGCTTTCTTGGCAAGGAAATGCATCAGGGTTAATGGAGAGGAAAGGCCGACTATGAAAGAAGTAGCAATGGAGCTAGAGGGTCTAATTTCTATGAAAAAACATCCTTGGGGAAAGCGAGAGGATATGATGTCTGAGGAATGTGAATACTTGCTTGGTCATGTAGCTGATGGATACGGAAATGCTAGTGCTAGCACTTCAACTGTCTATGATAGCATACAGAGAGAAGTAGCATTTGAGATTGAAGATGGGCGATGA | 1428 | 0.4146 | MGYCCVCKEGFRGNPYLSHPDLGCKDINECDDGKHRCSRRCHNVEGNYTCSCPPGYRGDGYIDGSGCKFPFMEISLGISVAFLFVFTFVSTLCWGHKQRSLKQLRKKYFEQNGGNYMLQQMYQQQGHTDRAKIFSEDELRTATNNFDENRILGRGGQGTVYEGILPDNTHVAIKKSRIGGDPRQIKDFINEVAVLSQINHRNVVKLFGCCLETEVPLLVYEYVDNGTLLEHIDPLKNEHPLSWEIRLRIAVETAEAISYLHSAAAIPIIHRDIKSANILLDHNHRAKVSDFGASRLVPLDETQVTTVVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLVELVTGNKAVDFNKPEQRNLAMHFASSLKEDNLWEILDKRVLHQKNEEQLKEVAFLARKCIRVNGEERPTMKEVAMELEGLISMKKHPWGKREDMMSEECEYLLGHVADGYGNASASTSTVYDSIQREVAFEIEDGR | 475 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4976g00003 | 475 | ProSitePatterns | Aspartic acid and asparagine hydroxylation site. | 41 | 52 | IPR000152 | - | |
Pral4976g00003 | 475 | ProSiteProfiles | EGF-like domain profile. | 26 | 59 | IPR000742 | - | |
Pral4976g00003 | 475 | CDD | EGF_CA | 26 | 59 | - | - | |
Pral4976g00003 | 475 | FunFam | Fibrillin 2 | 21 | 63 | - | - | |
Pral4976g00003 | 475 | SMART | egf_5 | 29 | 68 | IPR000742 | - | |
Pral4976g00003 | 475 | FunFam | Wall-associated receptor kinase 2 | 116 | 222 | - | - | |
Pral4976g00003 | 475 | SMART | serkin_6 | 146 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral4976g00003 | 475 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 34 | 420 | IPR045274 | GO:0007166 | |
Pral4976g00003 | 475 | Pfam | Protein kinase domain | 147 | 412 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral4976g00003 | 475 | SUPERFAMILY | EGF/Laminin | 19 | 58 | - | - | |
Pral4976g00003 | 475 | Pfam | Calcium-binding EGF domain | 26 | 57 | IPR001881 | GO:0005509 | |
Pral4976g00003 | 475 | ProSitePatterns | Calcium-binding EGF-like domain signature. | 26 | 50 | IPR018097 | GO:0005509 | |
Pral4976g00003 | 475 | Gene3D | Transferase(Phosphotransferase) domain 1 | 223 | 439 | - | - | |
Pral4976g00003 | 475 | FunFam | Wall-associated receptor kinase 2 | 223 | 439 | - | - | |
Pral4976g00003 | 475 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 268 | 280 | IPR008271 | GO:0004672|GO:0006468 | |
Pral4976g00003 | 475 | Gene3D | Laminin | 1 | 61 | - | - | |
Pral4976g00003 | 475 | Gene3D | Phosphorylase Kinase; domain 1 | 116 | 222 | - | - | |
Pral4976g00003 | 475 | ProSiteProfiles | Protein kinase domain profile. | 146 | 428 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral4976g00003 | 475 | SUPERFAMILY | Protein kinase-like (PK-like) | 129 | 416 | IPR011009 | - | |
Pral4976g00003 | 475 | CDD | STKc_IRAK | 152 | 419 | - | - | |
Pral4976g00003 | 475 | SMART | egfca_6 | 26 | 68 | IPR001881 | GO:0005509 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4976g00003 | Pral-Chr4976 | 38447 | 49477 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4976g00003 | 2 | 475 | Receptor kinase-like Gene Family | AT1G21250 | 51.230 | 4.31e-158 | 464 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Pral4976g00003 | Pkinase | 7.3e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4976g00003 | - | - | pcin:129293718 | 647.506 |