Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4976g00002 ATGAGTTTGAGTGCCCTGCACTTTAAACTGGTTTTGCTGGTCTGCACGGCGGCGGCGGCGGCGGCCCAAACGAAACGCGGTTGCGAAGACACTTGTGGGAACGTGAGCATCCCCTATCCCTTTGGCACCAGCAAGAACTGCTACATGAATGAAAGGTTTTTCGTGAACTGCACAACCACCACGACATCATCTGGACAAGCCACAACAAGTTTGATTTACGGTATTAACTTACCAGTTCTGGACATCTCCATTGATCCTCCTGAATTGACCTTCTCGGATAATGTTTCCAACCACTGCTATAATTCAAAGAATGGGTTTCCGTGGCACGTAATTTGGTTCAGGAACTTTTCAATATCAAACACGAAGAACAGCTTCACGGTGGTGGGCTGTGACACCTACGCTTACTTCCAGGACCTGAACAGCAGCTTTACAACAGGCTGCATGTTGAGTTGCACGAGGAGGACGAGGTTCGAGGAGGGGGCATGCTCCGGTGTGGGATGCTGCCAGACCAATTTCCCCCAAGCCATCAAGAATTATAATATCACCTTGATGAGTTTTAGCAACTACACGGACGTGCATAACTTCAACCCTTGCGGTTATGCCTTTGTTGCCAAGGAAGGATCCTTCAACTTCTCAAAACGAGACCTGCTAGATCTGGGCAACAGAAGACAGTTTCCCGTTGTTGTGGATTGGGCTGTTGCCAATCAGACATGCCATGAAGCCCAGAAAGATCAGAGCAGCTATGCCTGCAAGCAAAACAGTACATGCAAAAGCTCAGAAAGTGGTATGGGGTACTACTGCGTTTGTAAAGAAGGTTTCACAGGCAACCCCTACCTGTCTCACCCCGATCCTGGCTGCAAAGATACTAACGAGTGCGATGACGGGAAGCATCGCTGCAGCAGGAGATGCCACAATGCGGAAGGAAGTTACACGTGTTCTTGTCCGCCGGGTTACAGAGGCGACGGCTATATCGACGGATCAGGCTGCAAATTCCCTTTCATGGAAATCTCATTGGGCATTTCTGTTGCCTTGCTTTTTGTCTTCACATTTGTCTCCACATTATGCTGGGGACACAAGCAAAGATCACTAAAACAACTTAGAAGGAAGTATTTTGAGCAAAATGGAGGAAATTATCTGCTGCAGCAAATTTATCAACAACAAGGACATACTGATAGAGCCAAGATTTTTTCTGAAGATGAGCTTAAAACTGCTACAAACAACTTTGATGAAAGTAGAATTCTTGGCCGTGGAGGACAAGGCACAGTTTATAAGGGTATATTACCAGATAACACGCTTGTTGCCATCAAAAAGTCCAGAATAGGTGGGGATCCTAGACAGATTAAGGATTTTATCAATGAAGTGGCTGTACTTTCCCAAATTAACCATAGGAGTGTGGTCAAACTTTTTGGGTGTTGTCTTGAAACGGAAGTTCCTTTATTAGTTTATGAGTACGTGGACAATGGCACCCTTCTTGAACATATAGACCCACTAAAGAATGAGCATCCTCTTTCATGGGAGACTAGATTAAGGATTGCTGTAGAAACAGCCGAAGCCATCTCATATTTACACTCTGCTGCTTCTATTCCAATTATTCATCGCGACATTAAATCTGCCAACATACTATTAGATCACAATCATAGGGCAAAAGTTTCTGACTTTGGAGCCTCAAGACTTATTCCTCTTGATGAAACTCAAGTTACCACCGTCGTCCAAGGAACATTAGGATATTTGGATCCAGAATACCTCTTTACGGGTCAATTGAATGAGAAAAGTGATGTTTATAGCTTTGGGGTTGTGCTTGTGGAGCTAGTCACCGGAAATAAAGCAGTTGACTTCAACAAGCCAGAACAAAGAAATTTGGCTATGCACTTTGCATCTTCACTGAAAGAAGACAACTTGTGGGAAATTCTTGACAAGCGAGTGTTAGATCAAAAGAATGAAGAGCAGCTAAAAGAAGTTGCTTTCTTGGCAAGGAAATGCATCAGGGTTAATGGAGAGGAAAGGCCGACTATGAAAGAAGTATCAATGGAACTAGAGGGTCTAATTTCTATGGAAAAACATCCTTGGGGAAAGCAAGATGATATGATGTCTGAGGAATGTGAATACTTGCTTGGTCATGTAGCTGATGGATACGGAAATGCTAACGCTAGCACTTCAACTGTCTATGATAGCATACAGAGGAAAATAGCATTTGAGATTGAAGATGGGCGATGA 2214 0.4408 MSLSALHFKLVLLVCTAAAAAAQTKRGCEDTCGNVSIPYPFGTSKNCYMNERFFVNCTTTTTSSGQATTSLIYGINLPVLDISIDPPELTFSDNVSNHCYNSKNGFPWHVIWFRNFSISNTKNSFTVVGCDTYAYFQDLNSSFTTGCMLSCTRRTRFEEGACSGVGCCQTNFPQAIKNYNITLMSFSNYTDVHNFNPCGYAFVAKEGSFNFSKRDLLDLGNRRQFPVVVDWAVANQTCHEAQKDQSSYACKQNSTCKSSESGMGYYCVCKEGFTGNPYLSHPDPGCKDTNECDDGKHRCSRRCHNAEGSYTCSCPPGYRGDGYIDGSGCKFPFMEISLGISVALLFVFTFVSTLCWGHKQRSLKQLRRKYFEQNGGNYLLQQIYQQQGHTDRAKIFSEDELKTATNNFDESRILGRGGQGTVYKGILPDNTLVAIKKSRIGGDPRQIKDFINEVAVLSQINHRSVVKLFGCCLETEVPLLVYEYVDNGTLLEHIDPLKNEHPLSWETRLRIAVETAEAISYLHSAASIPIIHRDIKSANILLDHNHRAKVSDFGASRLIPLDETQVTTVVQGTLGYLDPEYLFTGQLNEKSDVYSFGVVLVELVTGNKAVDFNKPEQRNLAMHFASSLKEDNLWEILDKRVLDQKNEEQLKEVAFLARKCIRVNGEERPTMKEVSMELEGLISMEKHPWGKQDDMMSEECEYLLGHVADGYGNANASTSTVYDSIQRKIAFEIEDGR 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4976g00002 737 Pfam Wall-associated receptor kinase galacturonan-binding 28 85 IPR025287 GO:0030247
Pral4976g00002 737 FunFam Wall-associated receptor kinase 2 378 484 - -
Pral4976g00002 737 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 682 IPR045274 GO:0007166
Pral4976g00002 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Pral4976g00002 737 FunFam Wall-associated receptor kinase 2 485 701 - -
Pral4976g00002 737 SMART serkin_6 408 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00002 737 Pfam Calcium-binding EGF domain 288 319 IPR001881 GO:0005509
Pral4976g00002 737 CDD EGF_CA 288 321 - -
Pral4976g00002 737 ProSitePatterns Calcium-binding EGF-like domain signature. 288 312 IPR018097 GO:0005509
Pral4976g00002 737 Gene3D Laminin 243 290 - -
Pral4976g00002 737 SUPERFAMILY EGF/Laminin 281 320 - -
Pral4976g00002 737 Gene3D Laminin 291 326 - -
Pral4976g00002 737 SMART egfca_6 288 330 IPR001881 GO:0005509
Pral4976g00002 737 SMART egfca_6 242 287 IPR001881 GO:0005509
Pral4976g00002 737 ProSiteProfiles Protein kinase domain profile. 408 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00002 737 Gene3D Phosphorylase Kinase; domain 1 380 484 - -
Pral4976g00002 737 Pfam Protein kinase domain 409 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00002 737 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 303 314 IPR000152 -
Pral4976g00002 737 ProSiteProfiles EGF-like domain profile. 288 321 IPR000742 -
Pral4976g00002 737 Gene3D Transferase(Phosphotransferase) domain 1 485 701 - -
Pral4976g00002 737 SUPERFAMILY Protein kinase-like (PK-like) 391 677 IPR011009 -
Pral4976g00002 737 CDD STKc_IRAK 414 681 - -
Pral4976g00002 737 FunFam Fibrillin 2 283 325 - -
Pral4976g00002 737 SMART egf_5 237 287 IPR000742 -
Pral4976g00002 737 SMART egf_5 291 330 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4976g00002 Pral-Chr4976 21295 24209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4976g00002 22 737 Receptor kinase-like Gene Family AT1G21230 45.122 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral4976g00002 Pkinase 8.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4976g00002 - - pcin:129293718 789.26