Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4976g00001 ATGGGTTTGACAGCAATAATGCATTTGAAACTGGCATTACTGATCTGCACGGCGGCGGTCACGGCGGTGGCCCAAACAAAACCAGGTTGCAACACCACTTGTGGGAACGTGAGCATCCCCTATCCCTTTGGCACTAGCGAGAACTGTTACATAGACGAAACGTTCTTCCTAAACTGCACAACCACCACGTCCCCATCATCTGGAAAACCCACGACAAGTTTGATTTACGGCACTAATATACCAGTTCTCAACATCTCCATTGATCCTCCTGAATTAACCGTCTCAGCAAACGTTTCCAAACATTGCTATGATTCCAACTTCACCTTTTACTGGAACTCAATGTGGTTCTATAACAAGTTTTCTATGTCAAACACCAAGAACAGGTTCACTGTGGTGGGCTGTGACACTTTCGCTTTCATCAGGGACCTGAGAAGCAGGTTCATGACTGGCTGCGTGTTGAGTTGCAGTAACAAGACGAGTTTTGAAGACGGGGCATGTTCTGGTGTGGGATGCTGCCAGACCAATTTCCCCAAAGCCATCTGGAGCTATAATATCACTTTATACAGTTCTGAGAACTACACGGACGTGCTTGATTTTAACCCTTGTGGCTATGCGTTTATTGCCAAGGAAGGATCCTTCAACTTCTCGTATCGAGACCTGCTTGATCTCGGCAACAGAACAGCGTTTCCCGTCGTTGTGGATTGGGTTGTTTCCAATCAGACATGTGATGAGGCCCAGAAAGATGAAAGCAGATTTGCCTGCAAGCAAAACAGTAGATGCAAAGACTCAGAAAGTGGTATTGGGCATTACTGCGTTTGTAAAGAAGGTTTCAGAGGCAACCCCTACCTCTCTCACCATGATACAGCCTGCAAAGATATTAATGAGTGCGACGGGAACCATCGCTGCAGTAGGAGATGCCACAATGTGGAGGGAAATTATACGTGCTCTTGTCCGCCGGGTTATAGAGGTGACGGCTATATTGATGGATCAGGTTGCAAATTTCCTCTCATGGAAATTTCATTGGGCGTTTCTGTAGCCTTTCTTGTTGTCTTCACATTGATCTCCACATTATGCTGGGGACACAAGCAAAGAGCATTAAAGCGACTTAGAAGAAAGTATTTTGAGCAAAATGGAGGAAATATGCTGCAGCAACTTCATCAACAGCAAGAATACACTGATAGAACCAAGATTTTTACGGAAGATGAGCTTAAAATTGCCACAAATAACTTTGATGAAAGTAGAATTCTTGGTCGTGGAGGACAAGGCACGGTTTACAAGGGTATATTACCGGATAATACACATGTTGCCATAAAAAGGTCCAGAATAGGTGGGGATCCCAGACAAATTAAGGATTTTATCAATGAAGTGGCTGTACTTTCCCAAATCAACCATAGAAATGTGGTTAAACTTCTGGGGTGTTGTCTTGAAACTGAAGTTCCTTTGTTAGTTTACGAGTTTGTGGATAATGGCACCCTCCTTGACCATATAAACCCAACAAAGAATGAGCACTCTCTTTCATGGGAGACCCGATTAAGGATTGCTGCAGAAACAGCCGGGGCCATCTCATATTTACATTATGCTGCTTCTATTCCAATTATCCATCGTGATATTAAATCTGCCAATATACTATTAGATCATAATCATAGAGCGAAAGTTTCTGACTTTGGAGCCTCAAGACTTGTTCCTCTTGATGAAACTCAAATTACTACTGTGGTTCAAGGGACATTAGGATATTTGGATCCAGAATACCTTCTCACAGGTCAGTTGAACGAGAAAAGTGATGTCTATAGCTTTGGAGTTGTGCTTGCAGAACTAATCACTGGAAATAAAGCAGTTGAATTCAATAGGCCAGAAGAGAGAAATTTAGCTATGCACTTTGCATCTTTGATGAAAGAAGACAACTTGTGGAAGATTCTTGACAAGCGAGTGTTGGATGTGAAGAACGCAGAGCAACTAAAGGAAGTTGCTTTCTTGACAAGGAGGTGCATTAGAGTTAATGGAGAGGAAAGACCGACTATGAAAGAAGTAGCGATGGAATTAGAAGGTCTAATTGCTATGAAAAAGCATCCTTGGGTAAAGGGAGAGGATATGATGTCTGAAGAATGTGAATACTTGCTTGATCATGTAGCTGCTGGATATAGGAATGCTAGTGCTAGCACTTCAGCTGGCTTTGACGGTGGATATGGGAATGCTAGTGCCAACACTTTAGCTGGATATGATAGCATACAGAAACAAATAGCTTTTGAGATTGCAGATGGAGAGATGGGTTTGATGAATGCCTTGCATTTGAAACTGGTATTGCCGATCTGCACGACGGCGGCGGCGGCGGAGGCCCAAACTAAACCTGGTTGCGACAACAAGTGTGGGAACGTGAGCATCCCCTATCCCTTTGGCTCCAGCAAGAACTGCTACATGAATGAGAGATTTTTCGTGAACTGCACAACCACCACGACATCGTCTGGACAAGCCAAAACAAGTTTGATTTACGGTGTTAACAAACCAGTTCTGGACATCTCCGTTGATCCACCTGAATTGACCGTCTCCAATAATGTTTCCAAACACTGCTATAATTCAAAGCATGGGTTGCCGGTGCACCGAATTCAGTTCGGGAACTTTTCAATATCAAACACGAAGAACAGCTTCACAGTGGTGGGCTGTGACACCCACGCTTCCTTCAAGGACCTGAACAGCAGCTTTACAACAGGCTGCATGTTGAGTTGCACGAGCAGGACGAGGTTCGAGGAGGGGGCGTGCTCTGGTGTGGGATGCTGCCAGACCAATTTCCCCGATGCCATCATGAGCTATAGTATCACCTTGACGAGTTCTCGCAACTACACGGACGTGCATAACTTCAACCCTTGCGGCTATGCCTTTGTTGCCAAGGAAGGATCCTTCAACTTCTCATATCGAGACCTGCTTGATCTCAGCAACAAAACACAGTTTCCCCTCGTCCTGGATTGGGCTGTTGCCAATCAGACATGCCATGAAGCCCAGAAAGATCCGAGCAGCTACGCCTGCAAGCAAAACAGTATATGCAAAAGCTCAGAAGGTGGTATGGGTTACTGCTGCGTTTATAAAGAAGGTTTCAGAGGCAACCCCTACCTCTCTCACCCCGATCTTGGCTGCAAAGATATTAATGAGTGCGACGTAAAGAATCGCTGCAGCAGAAGATGCCATAATGTGGAAGGAAATTATACTTGTTCGTGTCCGCCGGGTTATAGAGGCGACGGCTATATCGACGGATCAGGCTGCAATTCCCTCTCATGCATTTCTTTAGCCTTACTAGTTCTATTCACATTTGTCTTCATATTATGCTGGGGACACAAGCAAAGATCACTAAAGCGACTTAGAAGAATGTATTTTGAGCAAAATGGAGGAAATTATATGCTGCAGCAAATTTATCGACAACAAGGACATACTGATAGGACCAAGATTTTTTCCGAAGAGGAGCTCAAAATTGCAACAAACAACTTCGATGAAAGCAGAATCCTTGGTCGTGGAGGCCAAGGTACGGTTTACAAGGGTATATTGTCAGATAACAGGCATGTTGCCATAAAAAAGTCCAGAATTAGTGGAAATCACAGGCAAATAAAGGATTTTATCAATGAAGTGGCTGTACTTTCTCAAATCAACCACAGGAATGTGGTTAAACTTTTCGGATGTTGTCTTGAAACTGAAGTTCCTTTGTTAGTGTATGAGTTTGTAGACAATGGCACCCTTCTTGAACATATAGACCCACTAAAAAACAAGAACTCTCTTTCATGGGAGACCCGATTAAGGATTGCTGCAGAAACAGCCGGGGCCATCTCATATTTACATTATGCTGCTTCTATTCCAATTATTCATCGTGATATTAAATCTGCCAACATACTATTAGATCATAATCATAGAGCGAAAGTTTCTGACTTTGGAGCCTCAAGACTTGTTCCTCTTGATGAAACTCAAATTACTACAGTGGTTCAAGGGACATTAGGGTATTTGGATCCGGAGTACCTCTTCACAGGTCAGTTGAATGAGAAAAGTGATGTCTATAGCTTTGGAGTTGTGCTTGTGGAGCTAATCACTGGAAATAAAGCAGTTGAATTCAATAGGCCAGAAGAGAGAAATTTAGCTATGCACTTTGCAACTTTGATGAAGGAAGACAACTTGTGGAAGATTCTTGACAAGCGAGTGTTGGATGTGAAGAACGCAGAGCAATTAAAGGAAGTTGCTTTCTTGGCAAGGAGGTGCATCAGAGTTAATGGAGAGGAAAGACCGACTATGAAAGAAGTAGCCATGGAATTAGAGGGTCTAATTGTTGTGAAAAAGCATCCTTGGGCAAAGCGAGAGGATATGATGTCTGAAGTATGTGAATATTTGCTTGGTCACGTGGCTAGCAGATATGGGAATGCTCCTGCTGGCACTTCAGCTGGCTATAATGGTGGCTATGGGAATGCTAGTGCCGACACTTTAGCTGGCTATGATAGCATACAGAAACAAATGGAATTTGAGATTGCAGATGGGCGATGA 4509 0.436 MGLTAIMHLKLALLICTAAVTAVAQTKPGCNTTCGNVSIPYPFGTSENCYIDETFFLNCTTTTSPSSGKPTTSLIYGTNIPVLNISIDPPELTVSANVSKHCYDSNFTFYWNSMWFYNKFSMSNTKNRFTVVGCDTFAFIRDLRSRFMTGCVLSCSNKTSFEDGACSGVGCCQTNFPKAIWSYNITLYSSENYTDVLDFNPCGYAFIAKEGSFNFSYRDLLDLGNRTAFPVVVDWVVSNQTCDEAQKDESRFACKQNSRCKDSESGIGHYCVCKEGFRGNPYLSHHDTACKDINECDGNHRCSRRCHNVEGNYTCSCPPGYRGDGYIDGSGCKFPLMEISLGVSVAFLVVFTLISTLCWGHKQRALKRLRRKYFEQNGGNMLQQLHQQQEYTDRTKIFTEDELKIATNNFDESRILGRGGQGTVYKGILPDNTHVAIKRSRIGGDPRQIKDFINEVAVLSQINHRNVVKLLGCCLETEVPLLVYEFVDNGTLLDHINPTKNEHSLSWETRLRIAAETAGAISYLHYAASIPIIHRDIKSANILLDHNHRAKVSDFGASRLVPLDETQITTVVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLAELITGNKAVEFNRPEERNLAMHFASLMKEDNLWKILDKRVLDVKNAEQLKEVAFLTRRCIRVNGEERPTMKEVAMELEGLIAMKKHPWVKGEDMMSEECEYLLDHVAAGYRNASASTSAGFDGGYGNASANTLAGYDSIQKQIAFEIADGEMGLMNALHLKLVLPICTTAAAAEAQTKPGCDNKCGNVSIPYPFGSSKNCYMNERFFVNCTTTTTSSGQAKTSLIYGVNKPVLDISVDPPELTVSNNVSKHCYNSKHGLPVHRIQFGNFSISNTKNSFTVVGCDTHASFKDLNSSFTTGCMLSCTSRTRFEEGACSGVGCCQTNFPDAIMSYSITLTSSRNYTDVHNFNPCGYAFVAKEGSFNFSYRDLLDLSNKTQFPLVLDWAVANQTCHEAQKDPSSYACKQNSICKSSEGGMGYCCVYKEGFRGNPYLSHPDLGCKDINECDVKNRCSRRCHNVEGNYTCSCPPGYRGDGYIDGSGCNSLSCISLALLVLFTFVFILCWGHKQRSLKRLRRMYFEQNGGNYMLQQIYRQQGHTDRTKIFSEEELKIATNNFDESRILGRGGQGTVYKGILSDNRHVAIKKSRISGNHRQIKDFINEVAVLSQINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLEHIDPLKNKNSLSWETRLRIAAETAGAISYLHYAASIPIIHRDIKSANILLDHNHRAKVSDFGASRLVPLDETQITTVVQGTLGYLDPEYLFTGQLNEKSDVYSFGVVLVELITGNKAVEFNRPEERNLAMHFATLMKEDNLWKILDKRVLDVKNAEQLKEVAFLARRCIRVNGEERPTMKEVAMELEGLIVVKKHPWAKREDMMSEVCEYLLGHVASRYGNAPAGTSAGYNGGYGNASADTLAGYDSIQKQMEFEIADGR 1502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4976g00001 1502 Gene3D Laminin 247 294 - -
Pral4976g00001 1502 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 683 IPR045274 GO:0007166
Pral4976g00001 1502 ProSiteProfiles Protein kinase domain profile. 1158 1440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00001 1502 ProSiteProfiles EGF-like domain profile. 292 324 IPR000742 -
Pral4976g00001 1502 CDD STKc_IRAK 1164 1431 - -
Pral4976g00001 1502 FunFam Wall-associated receptor kinase 2 1128 1234 - -
Pral4976g00001 1502 FunFam Wall-associated receptor kinase 2 487 703 - -
Pral4976g00001 1502 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 1058 1069 IPR000152 -
Pral4976g00001 1502 SUPERFAMILY EGF/Laminin 292 325 - -
Pral4976g00001 1502 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 306 317 IPR000152 -
Pral4976g00001 1502 FunFam Wall-associated receptor kinase 2 1235 1451 - -
Pral4976g00001 1502 ProSitePatterns Calcium-binding EGF-like domain signature. 292 315 IPR018097 GO:0005509
Pral4976g00001 1502 SMART serkin_6 410 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00001 1502 SMART serkin_6 1158 1440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00001 1502 FunFam Wall-associated receptor kinase 2 380 486 - -
Pral4976g00001 1502 SMART egf_5 241 291 IPR000742 -
Pral4976g00001 1502 SMART egf_5 1047 1090 IPR000742 -
Pral4976g00001 1502 SMART egf_5 295 333 IPR000742 -
Pral4976g00001 1502 CDD EGF_CA 292 324 - -
Pral4976g00001 1502 FunFam Fibrillin 2 287 328 - -
Pral4976g00001 1502 Gene3D Transferase(Phosphotransferase) domain 1 487 701 - -
Pral4976g00001 1502 Gene3D Transferase(Phosphotransferase) domain 1 1235 1451 - -
Pral4976g00001 1502 SUPERFAMILY Protein kinase-like (PK-like) 1140 1428 IPR011009 -
Pral4976g00001 1502 CDD STKc_IRAK 416 683 - -
Pral4976g00001 1502 Gene3D Laminin 295 334 - -
Pral4976g00001 1502 Gene3D Laminin 1044 1088 - -
Pral4976g00001 1502 ProSiteProfiles Protein kinase domain profile. 410 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00001 1502 ProSitePatterns Calcium-binding EGF-like domain signature. 1044 1067 IPR018097 GO:0005509
Pral4976g00001 1502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1280 1292 IPR008271 GO:0004672|GO:0006468
Pral4976g00001 1502 CDD EGF_CA 1044 1076 - -
Pral4976g00001 1502 Pfam Wall-associated receptor kinase galacturonan-binding 30 92 IPR025287 GO:0030247
Pral4976g00001 1502 Pfam Calcium-binding EGF domain 292 322 IPR001881 GO:0005509
Pral4976g00001 1502 Pfam Calcium-binding EGF domain 1044 1077 IPR001881 GO:0005509
Pral4976g00001 1502 Pfam Protein kinase domain 411 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00001 1502 Pfam Protein kinase domain 1159 1424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4976g00001 1502 SUPERFAMILY EGF/Laminin 1044 1077 - -
Pral4976g00001 1502 ProSiteProfiles EGF-like domain profile. 1044 1076 IPR000742 -
Pral4976g00001 1502 SMART egfca_6 292 333 IPR001881 GO:0005509
Pral4976g00001 1502 SMART egfca_6 246 291 IPR001881 GO:0005509
Pral4976g00001 1502 SMART egfca_6 1044 1090 IPR001881 GO:0005509
Pral4976g00001 1502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Pral4976g00001 1502 SUPERFAMILY Protein kinase-like (PK-like) 389 680 IPR011009 -
Pral4976g00001 1502 FunFam Fibrillin 2 1039 1080 - -
Pral4976g00001 1502 Gene3D Phosphorylase Kinase; domain 1 381 486 - -
Pral4976g00001 1502 Gene3D Phosphorylase Kinase; domain 1 1129 1234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4976g00001 Pral-Chr4976 2251 11246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4976g00001 24 753 Receptor kinase-like Gene Family AT1G21230 46.471 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral4976g00001 Pkinase 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4976g00001 - - vvi:100262500 1427.15