Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4972g00009 ATGCGTTATTCCGACGCATGGTCTCCGGCTTTTCCTTCGGACCACCGTGCCGCCAGCTGCATGCCGGAAGTCCAAAGCCACCACAGCTTCTATGGCATTAACAATAATGAAGGGTTTCAGAGCTTCAGCGGCGGATTATTATACCAGCAACCATATATTAGTGACTTTGCAGATGAAAGTTGTGGCTTCGTGGAGGACGTCAAGCCTCTTTCTTGTCCTAAAGCTTCAAGAGAAAACTGGGGAATTCAAGGGAATAATCAAGTGCTAGGAGTTGATCAAGAGAACATTAAGGTGGGAAGGTATTCGGAAGAAGAAAGAAAGGAAAGAATTCTGCGATATTTGAGGAAAAGAAACCAAAGGAACTTCAACAAGACAATCAAGTATGCTTGTCGGAAAACCCTAGCTGATCGCAGAGTCAGAGTCAGAGGAAGATTTGCAAGAAACAATGAGCTTTGTGAGGATGAAATGACAATGAAAAAAGAATATTGA 489 0.4335 MRYSDAWSPAFPSDHRAASCMPEVQSHHSFYGINNNEGFQSFSGGLLYQQPYISDFADESCGFVEDVKPLSCPKASRENWGIQGNNQVLGVDQENIKVGRYSEEERKERILRYLRKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEDEMTMKKEY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4972g00009 162 Pfam CCT motif 106 148 IPR010402 GO:0005515
Pral4972g00009 162 ProSiteProfiles CCT domain profile. 106 148 IPR010402 GO:0005515
Pral4972g00009 162 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 43 150 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4972g00009 Pral-Chr4972 39769 40526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4972g00009 102 162 C2C2-CO-like Transcription Factor Family AT5G57660 44.262 1.20e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4972g00009 CCT 9.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4972g00009 - - gmx:102670442 192.586