Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4972g00005 ATGGTTATGGTCGACGCTGGATCGACGATCGTCATGGCCACTTCGCCGTTGAAAAAGATCGAACACGCCCACCAGCTGTACCGCGATGGACGGTATGGCGACGCGCTAGGTTTCTACACGGAGGCTATTGGGATGGCTAAGACTAAGGCTCAAAAGATCGCTTTGCATAGCAATAGAGCTGCCTGTTATCTGAAGCTTCACGATTTCAAGAAGGCTGCAGAAGAATGTACCTCAGTGCTTGAGCTAGATCACAAGCACAGTGGAGCTTTGATGCTGCGGGCTCAAACATTAGTCACCCTTAAGGAGTACCATTCAGCACTTTTTGATGTCAATCGACTGTTAGAGTTGGATCCATCCTCAGAGGTGTATCAAAATCTTCAAGCTCGCTTAAGGACGCAATTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTGAAGAACAGGGATATGAAGAAGAGGTGACAGTAAAAGAAAACAATAAATGGGAAAAATCCCAAGAGAATGATGTTGGGAGAGATCATAAAGATGAGCTTGCCAAGGCTACTATTAATACTGAAATAGACGAGAAGTCATCATCTGAACAAGGAATAGACCAAAACTCTGAGCCAAAAACTTCCACACCAGAGACGATTGCCAAAGCACCACAGGAGGAACCAGCGGAGCAACATTCCAAAGCATGGCAATCGATTCCAAAACCGAAAGGGCATTCAACTTTAAACTATGCACGATGGGACAGTGTTGAAGACGATTCTAGTGAAGATGACGACGACGATGATGAAGATGAAGAAGAATCTCAACCCCAGTACCGATTTCGTGTAAGAACCATAGGTGTACGATCGGTAAAGTGA 852 0.4531 MVMVDAGSTIVMATSPLKKIEHAHQLYRDGRYGDALGFYTEAIGMAKTKAQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELDPSSEVYQNLQARLRTQLSLAPIPESEEEFEEQGYEEEVTVKENNKWEKSQENDVGRDHKDELAKATINTEIDEKSSSEQGIDQNSEPKTSTPETIAKAPQEEPAEQHSKAWQSIPKPKGHSTLNYARWDSVEDDSSEDDDDDDEDEEESQPQYRFRVRTIGVRSVK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4972g00005 283 Gene3D Tetratricopeptide repeat domain 15 136 IPR011990 GO:0005515
Pral4972g00005 283 Pfam Tetratricopeptide repeat 68 130 - -
Pral4972g00005 283 MobiDBLite consensus disorder prediction 141 283 - -
Pral4972g00005 283 MobiDBLite consensus disorder prediction 249 265 - -
Pral4972g00005 283 MobiDBLite consensus disorder prediction 186 213 - -
Pral4972g00005 283 SUPERFAMILY TPR-like 21 133 IPR011990 GO:0005515
Pral4972g00005 283 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 12 283 - -
Pral4972g00005 283 SMART tpr_5 87 120 IPR019734 GO:0005515
Pral4972g00005 283 SMART tpr_5 53 86 IPR019734 GO:0005515
Pral4972g00005 283 MobiDBLite consensus disorder prediction 153 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4972g00005 Pral-Chr4972 22198 24574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4972g00005 18 134 Calmodulin-binding Proteins AT3G25230 34.884 6.95e-15 72.8