Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4971g00002 ATGGTTTGTGATTCTTCTCCTTCTTCTTTCCATGATTCTCAAATAAAACACGATGTGTTTATCAGTTTCCGCGGCCAGGACACTAGACGCAGTTTTGTGTGCCATCTGCTAAAGGAACTATGTCGGGTGAAAATTAAACCTCATGTAGATGAGGACATGGAGAGAGGAGAAGAAATATCATCTTCGCTTCTGAAAGCAATTCAAGAATCGAAAATTTCAATCGTCATATTCTCAGAAAGCTATGCCTCTTCAAGATGGTGCTTGAATGAGCTTGAAAAAATAATCGAGTCCAGGAACGTGAACAAACAGATTGTCTTACCCGTTTTCTACGGCATAGATCCCTCAGATGTACGGCATCAGAAAGGCGCTTATGAAAATGCATTTGCTGATCATGAATTGAATCTTCAAGGAAACGATTTGAAGGTGCAAAATTGGAGATCAGCCATGACGGATGCTGCTAACATATCTGGCTATGTTTCATCCGGTTCCAATCATGACTCTGAGCTCATCGAGAAAATCATCAATGGTGTTTCATTAAGATTGAATGCTACTCGTCCTTATCCTAGTGAAATAGAAGGCCTTGTTGGAATTGATCAACATGATGCTCCTTGTCCTAGTGAATCAGAAGGCCTTGTTGGAATTGATCAACATGATGTTTCGTTAAGATTGAATGTTACCCATCCTTGTCCTAGTGAATCAAAAGGCCTTGTTGGGATTGATCAACATGTTGCACGTATTAGATTATTTTTGGAAATGGAGTCAGAAGAAGTTCAAATCCTTGGAATTTGTGGCATCAGTGGCATAGGTAAAACAACCATTGCCCAAGTTGCATATGACGAATTCTCTTCCCACTATGAAGGCCGTTGCTTTTTACACAATGTGAGAGAAGAATCGGAAGAGCATGGGCTGGAATATTTAAGTGACAAACTTATTTCTAAACTGCAGGAGGGTAAATCCATTCCTGTTCAAGAGATGCCTATTAGTAAAAGAAGAGTTTTGGTGGTGCTTGATGATGTGGGTACTCGAGAACAATTAAAGCATCTGGTTCCAGAGGGAATTTGTTGGGGACCAGGTAGTAAAGTCATTGTAACAAGCAAAAAGAAGCAAGAGCTAGCTGCTGCGGGAAGACTACTTCATGACATATATGAGGTCAAGGAATTGGACTTTAAAGAATCCCTCAAGCTTTTCAGCTTAAATGCCTTCAAAAAGGGCCATCCTGAAAGGGGATATGAAGATCTTTCAAAAAGACTAGTTGCTTATGCCAAGGGCCTTCCTCTAGCTTTGAAAGTTCTGGGTTTGTGTCTTTGTTCCAGAGGCAAAGAAGCATGGGAAAATACATTGAGAAAACTTGAGAAGCATGCCCCTCCTCCAATTCGAGATGTGTTGAAAATGAGTTATGATGAATTAGAGGGTGTACAAAGGCAGATATTTCTTGACATCACTTACTTTCTTGGACAAAAACGTAAAGATCAAATCATGAGCCTAAATGATGCCAATGGCATTTTTGTTGTGGATGGACTTTCTGGTACGGTATGA 1536 0.4023 MVCDSSPSSFHDSQIKHDVFISFRGQDTRRSFVCHLLKELCRVKIKPHVDEDMERGEEISSSLLKAIQESKISIVIFSESYASSRWCLNELEKIIESRNVNKQIVLPVFYGIDPSDVRHQKGAYENAFADHELNLQGNDLKVQNWRSAMTDAANISGYVSSGSNHDSELIEKIINGVSLRLNATRPYPSEIEGLVGIDQHDAPCPSESEGLVGIDQHDVSLRLNVTHPCPSESKGLVGIDQHVARIRLFLEMESEEVQILGICGISGIGKTTIAQVAYDEFSSHYEGRCFLHNVREESEEHGLEYLSDKLISKLQEGKSIPVQEMPISKRRVLVVLDDVGTREQLKHLVPEGICWGPGSKVIVTSKKKQELAAAGRLLHDIYEVKELDFKESLKLFSLNAFKKGHPERGYEDLSKRLVAYAKGLPLALKVLGLCLCSRGKEAWENTLRKLEKHAPPPIRDVLKMSYDELEGVQRQIFLDITYFLGQKRKDQIMSLNDANGIFVVDGLSGTV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4971g00002 511 Gene3D - 14 186 IPR035897 -
Pral4971g00002 511 Gene3D - 221 375 IPR027417 -
Pral4971g00002 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 480 IPR027417 -
Pral4971g00002 511 SMART till_3 16 155 IPR000157 GO:0007165
Pral4971g00002 511 Gene3D - 386 470 IPR042197 -
Pral4971g00002 511 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Pral4971g00002 511 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 489 IPR044974 GO:0006952
Pral4971g00002 511 Pfam TIR domain 16 197 IPR000157 GO:0007165
Pral4971g00002 511 PRINTS Disease resistance protein signature 326 340 - -
Pral4971g00002 511 PRINTS Disease resistance protein signature 259 274 - -
Pral4971g00002 511 PRINTS Disease resistance protein signature 421 435 - -
Pral4971g00002 511 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pral4971g00002 511 Pfam NB-ARC domain 240 469 IPR002182 GO:0043531
Pral4971g00002 511 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4971g00002 Pral-Chr4971 25392 27579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4971g00002 2 511 WRKY Transcription Factor Family AT4G12020 24.808 1.40e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4971g00002 - - ahf:112728444 394.815