Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4970g00002 ATGGCTTCTTCTTCTTCTTTCTTCAATGATTCTGAAAAAAAATACGATGTGTTCATCAGTTTCAGCGGCAAGGATGTTAGACGAGGTTTTCTGAGTCATCTAGTAAAGGAACTACGTCGGGAGAAAATTATGGCTTATGTAGATGAAAAAATGAAAAGCGGAGAACAAATATCATCCTCGCTTCGGGGAGCAATTCAAAACTCGCAAATCTCAATCGTCATATTCTCAAAAAACTACGCCTCTTCAAGCTGGTGTTTGGATGAGCTTGAAGAAATCATGAAAATGAAGGAACAAATTGTTTTACCCGTTTTTTACTACTTTGATCCCTCGAATGTTCAAAATTGGAGATCAGCCTTGAAGAATGCTGCTGAGCTATCTGGCTATAATACGTCCGATTATCGTAATGACTCTAAGCTCATAGATGACATTGTCAATGGTGTTTCGTCAAGGTTGAATATCTCTCCTAGTGAATCAAAAGGCCTTGCTGGGATTGATCAACTTCTTGATTGTATTAGATCGTTTTTGGAAAGGAAGTCAGAGGAAGTTCAAATCCTTGGAATTTGGGGCATGAGTGGCATCGGTAAATCAACCATTGCACAAGTTGCAATTGACAAATTCTCTTCCCACTTTGACGGCTCTTACTTTTTAGAAAATGTGAGAGAAGAATCGCAAAAGCATCGGCTGAAATCTTTAAGAGAGAAACTTGTTTCTGAACTGCAAGAGGAAAAATCCTCTTTTGTTCATAAAAGCCTTGTTAGACGAAGAAAAGTTTTTGTCGTGCTTGATGATGTGGGTTTTTCAGAACAACTACAGTATTTGGTTACAGATGGAATTCACTGGGGACCTGGTAGTAGATTCATTGTAACAAGCAAAGACAAGCAAGTGCTAACTGCTGGAGGAGTTCATGCCATACATGAAGTCAAGGAATTGGGCCCTGAAGAATCCCTTAAGCTTTTCAGCTTAAATGCCTTCAAAAAAAGCCATCCTGAAAAGGGATATGAGGAACTTTCAAAAAGGGCAGTAGGTTATGCCAAGGCCCTTCCTCTAGCTTTAAAAGTTGTGGGTTCATCTCTTTGTTCTAAAGACAGAAGAACATGGGAAAGTACACTGAGAAAACTTGAGGGGTACCCCGATCCTCAAATTCAAGATGTGTTGAAAACGAGCTATGATGGATTAGATGATGTGCTAAGGGATGTATTTCTTGACATTGCTTTCTTTTACAAAGGAGAAGATAAAGATCATGTCATAAGGCTACTTGATGCCAATAACCTTTTTGCTGCTTATAGAATAGAAGGACTTCTAGATAGAGCTCTTATATCCATTTCAAATGACAAGGTAATACAAATGCATGACTGA 1356 0.3872 MASSSSFFNDSEKKYDVFISFSGKDVRRGFLSHLVKELRREKIMAYVDEKMKSGEQISSSLRGAIQNSQISIVIFSKNYASSSWCLDELEEIMKMKEQIVLPVFYYFDPSNVQNWRSALKNAAELSGYNTSDYRNDSKLIDDIVNGVSSRLNISPSESKGLAGIDQLLDCIRSFLERKSEEVQILGIWGMSGIGKSTIAQVAIDKFSSHFDGSYFLENVREESQKHRLKSLREKLVSELQEEKSSFVHKSLVRRRKVFVVLDDVGFSEQLQYLVTDGIHWGPGSRFIVTSKDKQVLTAGGVHAIHEVKELGPEESLKLFSLNAFKKSHPEKGYEELSKRAVGYAKALPLALKVVGSSLCSKDRRTWESTLRKLEGYPDPQIQDVLKTSYDGLDDVLRDVFLDIAFFYKGEDKDHVIRLLDANNLFAAYRIEGLLDRALISISNDKVIQMHD 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4970g00002 451 Gene3D - 310 393 IPR042197 -
Pral4970g00002 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 403 IPR027417 -
Pral4970g00002 451 Gene3D - 11 152 IPR035897 -
Pral4970g00002 451 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 451 IPR044974 GO:0006952
Pral4970g00002 451 FunFam Disease resistance protein (TIR-NBS-LRR class) 312 393 - -
Pral4970g00002 451 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 128 IPR035897 -
Pral4970g00002 451 ProSiteProfiles TIR domain profile. 13 151 IPR000157 GO:0007165
Pral4970g00002 451 PRINTS Disease resistance protein signature 344 358 - -
Pral4970g00002 451 PRINTS Disease resistance protein signature 184 199 - -
Pral4970g00002 451 PRINTS Disease resistance protein signature 251 265 - -
Pral4970g00002 451 Gene3D - 153 301 IPR027417 -
Pral4970g00002 451 Pfam TIR domain 14 157 IPR000157 GO:0007165
Pral4970g00002 451 SMART till_3 14 150 IPR000157 GO:0007165
Pral4970g00002 451 Pfam NB-ARC domain 167 392 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4970g00002 Pral-Chr4970 32392 34672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4970g00002 11 449 WRKY Transcription Factor Family AT4G12020 28.755 3.62e-47 173