Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4963g00075 ATGGCACAAGATACTTCTGCTGTTGATTCACATCACAGGCGGCCTGGGCTATTGAAAGATCAAGTTTTCTTGGTTAAAAGGAAAGACTCTGATCGCTATGAGATTGCTCCAATCCAAGATCAACTATCATTTGAGAAGGGTTTTTTTGTAGTAATCCGCGCATGCCAGTTGTTGTCCCAAAATAATGATGGAATAATATTGGTAGGATTGGCTGGTCCTTCAGGCGCTGGGAAGACTGTATTCACTGACAAAATAGTCAGTTTCATGCCCAGCATTGCAGTCATTTCGATGGACAATTACAATGATTCTAGTCGAATTATTGATGGAAATTTTGATGATCCACGCTTGACGGACTATGACACATTGCTTCAGAATCTTCAAGATTTAAAGGCTGGAAAGTCAGCTGAGGTTCCAATCTATGATTTCAAGTCCAGTTCTCGTATAGGATACAGGACAGTCGAAGTCCCAAGCTCCCGAATTGTGATCTTAGAGGGTATCTATGCTTTGAGTGAGAAGTTGCGACCACTACTGGACCTTCGTATATCTGTTACAGGTGGAATTCATTTTGACCTTGTCAAACGAGTTATACGTGACATTCAACGTGCTGGTCAACAACCTGCAGAAATCATTCATCAAATATCTGAGACGGTATTTCCAATGTACAAGGTCTTTATTGAGCAAGATCTGCAGACAGCACATATCAAAATAACCAACAAGTTCAATCCATTTACTGGGTTCCGGAGTCCTACTTACATATTGAAATCAGCAAGGGATGTGACAGTTGAACAAATTAAAGGTGTTTTCTTTGAAGATTTTAAGGAAGCAAATGAGCAGATTTATGACATATATCTTCTACCACCGGGTGAAGATCCAGAAACTTGCCAATCTTATTTAAGGATGCGGAATAAGGAGGGGAAGTACTGTCTAATGTTTGAGGAATCGGTGACGGATAGTCCATTTGTCATTTCACCAAGAATAACTTTTGAGGTTAGTGTGCGGCTCCTTGGTGGCCTGATGGCCCTGGGATACACAATAGCTACCATTCTAAAAAGAAACAGCCATGTATTCTCTGATGATAGGGTGTCTGTGAAACTAGATTGGCTTGAGCAACTTAATCGACAATATGTTCAGGTGCAAGGAAAAGATCGCTCAATTGTCAAATGCATTGCCCAGCAGCTCGGCATGGAGGGTTCCTATATAGCTCGTACGTACATTGAACAAATACAACTGGAAAAGATTGTAGATGAGGTTATGGCCCTTCCAGATGATTTAAAAACAAATCTTGGCCTTGATGAGGATATGGTGTCTAGCCCCAAAGAAGCACTTTCTAAAGCCTTTGCGGATAGGATTCCTGCAAAAAAAACGCACATGAGTGGTATGTCCCATTCGTATACAAGCCAAAGGGACAAAAATCTACTCAAACATACTCGATATGGTGCCAGCAACAAAGGGTTCGGTGAAAGAAATCCAGATTCCTCCATAGCGCTAACAAATGAGCTTTCAGAACAAATTTCTTCCCTCAACGATAGAATGGATGAGTTTACAAGTCGTATTGAAGAGCTGAATTCCAAGTTAAATAAAAATTCTCCAAGCCAACAAACCGCCACACTCCAAGCTGAAGTCTGCAATGGTTCTGCTCCCACCTCTCACTTCATAACTCGTTTGGAAAGTGGTTCTCTAGCTGGATCTATTATGAAGTCCTCATCTTCATTGCAATTAGCTAAGGAGTCACCTTTAACGGATGAGATATTGGGTATTGCAAAAGGGCAGCGCCATATCATGCAGAAAGTAGACAACCTCAATAGCCTTCTCCTTGGAATTGGAAACATGGGAGCAAGGTCTCACCAAGCAAGAGCCAACAGGACAAGCATGGCTTCTTCTGCATCAGAATCTACTTCAGTCCGTGCCCTGCTTGCTATCACTTTTGGTTGTGTTGGGTTATTCATGGTGAAGGGCTTGATGTCTAGAACTTGA 1974 0.4179 MAQDTSAVDSHHRRPGLLKDQVFLVKRKDSDRYEIAPIQDQLSFEKGFFVVIRACQLLSQNNDGIILVGLAGPSGAGKTVFTDKIVSFMPSIAVISMDNYNDSSRIIDGNFDDPRLTDYDTLLQNLQDLKAGKSAEVPIYDFKSSSRIGYRTVEVPSSRIVILEGIYALSEKLRPLLDLRISVTGGIHFDLVKRVIRDIQRAGQQPAEIIHQISETVFPMYKVFIEQDLQTAHIKITNKFNPFTGFRSPTYILKSARDVTVEQIKGVFFEDFKEANEQIYDIYLLPPGEDPETCQSYLRMRNKEGKYCLMFEESVTDSPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVSVKLDWLEQLNRQYVQVQGKDRSIVKCIAQQLGMEGSYIARTYIEQIQLEKIVDEVMALPDDLKTNLGLDEDMVSSPKEALSKAFADRIPAKKTHMSGMSHSYTSQRDKNLLKHTRYGASNKGFGERNPDSSIALTNELSEQISSLNDRMDEFTSRIEELNSKLNKNSPSQQTATLQAEVCNGSAPTSHFITRLESGSLAGSIMKSSSSLQLAKESPLTDEILGIAKGQRHIMQKVDNLNSLLLGIGNMGARSHQARANRTSMASSASESTSVRALLAITFGCVGLFMVKGLMSRT 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4963g00075 657 ProSiteProfiles CYTH domain profile. 252 410 IPR023577 -
Pral4963g00075 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 238 IPR027417 -
Pral4963g00075 657 Gene3D - 66 245 IPR027417 -
Pral4963g00075 657 PRINTS Uridine kinase signature 132 147 - -
Pral4963g00075 657 PRINTS Uridine kinase signature 65 82 - -
Pral4963g00075 657 PRINTS Uridine kinase signature 188 198 - -
Pral4963g00075 657 PRINTS Uridine kinase signature 224 237 - -
Pral4963g00075 657 Pfam CYTH domain 270 404 IPR023577 -
Pral4963g00075 657 SUPERFAMILY CYTH-like phosphatases 276 407 IPR033469 -
Pral4963g00075 657 CDD UMPK_like 67 239 - -
Pral4963g00075 657 Gene3D - 254 413 - -
Pral4963g00075 657 PANTHER URIDINE KINASE 32 423 - -
Pral4963g00075 657 Coils Coil 497 524 - -
Pral4963g00075 657 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4963g00075 Pral-Chr4963 616779 627339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4963g00075 67 225 PRT Gene Family AT1G55810 29.762 5.41e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4963g00075 K00876 - qsa:O6P43_032837 973