Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4963g00061 ATGATGCCCCCTGAGCAAGAAACCACTACTGTACAGGTCACGCCAAGCATTCCGGCCATCCCCAACCGCCTGCCGCCGGAGAACAGCTCCGTTCACGCCGACCCAGGAGGTTCCGCCTCTATTGAGGACAAGCCCAGCTTGGATAATTATGTCATTCCTCTTCATCAGCTCCACCCATCAGCAACACGTTCCGTTCTTCATCAATCCTTGCGACCTGTTACCCTCAAATTTGAAGACGTTTCTTACTGTATAACCTTTGGGAGCAAGAAGAATGGAGGTTGTTTTTCTTCACAAAACCCGAAACCGACCCGGACGATTCTCAACGGCGTGACTGGGATAGTCCGGCCTGGTGAATTGATGGCAATGCTGGGCCCATCAGGCAGCGGCAAGACCACGCTACTCACGGCGCTAGCTGGCCGGCTCGCCGGAAAATTCACCGGCAACATAACCTACAATGGCCTTCCTTTTTGTAGCTCCATGAAGCGCATGACTGGCTTTGTCTTGCAAGACGATGTGTTATACCCTCACCTCACTGTTCTTGAGACGCTGGTTTTTACAGCTTTGTTGAGACTTCCCAAAAGCCTCACCAGAGAAGAGAAGGTAGAACAAGCCGAGATGGTCATCACGGAGCTCGGGTTAACCAGGTGCAGGAACACCGCCGTGGGTGGCGGAACCGCCTTGTTCCGGGGAGTTTCGGGTGGGGAGCGAAAGCGGGTCAGTATTGGGCAGGAGATGCTGGTGAACCCGAGTTTGTTGTTGCTCGATGAACCCACCTCCGGGCTGGACTCGACGGCCGCTCAACGCATAGTGGCGATGCTCCGAGGTTTGGCACGGCATGGCCGGACGGTGGTGACCACTATTCATCAGCCGTCAAGCAGGTTGTACAGGATGTTCGATAAGGTTGTTGTACTATCGGACGGGTGCCCGATTTATGCTGGACAATCGGGTCGGGTTATGGAATATCTTGAGTCCATCGGATATCCGCCCACTTTCAACTTCATGAACCCGGCCGATTTTCTTCTTGACCTTGCTAATGGCATTGTGGATGATGTTAAGCTGGATGATCAGAATGAGATGCATGGCGGATTAGACCACATTGAAGATCAATCTTCAGTAAAAGAGTCTCTGGTTTTATCCTATAAAAAGAATTTATATCCTGCTCTGAAAGAAGAGATTCAGCTAAAGAATGAAGGCGCAGCTAGTTCAACATCAGGAACACCCAGAAGCTCAGAGAACAAGTGGAACACGAGCTGGTGGGAGCAATTCAGGGTTCTGCTTAAGAGGGGTTTACAGGAGAGAAGACACGAATCTTATTCAGGCTTAAAGATTTTCCAGGTCTTATCTGTCTCAATTCTCTCAGGCCTTCTCTGGTGGAATTCTGATCCTTCGCACGTACAAGATCAGTTAGGCCTGCTTTTCTTCTTCTCCATCTTCTGGGGATTCTTCCCACTATTCAACGCCATCTTCGCATTCCCTTTGGAGAGGCCAATGCTGATAAAAGAAAGATCCTCAGGAATGTACCATCTTTCATCTTACTACGTAGCCAGAATGGTGGGTGACCTACCCATGGAACTTGTCCTTCCCACAATCTTTGTTACCCTAAGCTACTGGATGGGTGGCCTCAAGCCTTCACTAATCACCTTTATGTTAACCCTCTTCATCATCATCTTAAATGTGCTAGTCTCTCAAGGAATAGGCCTAGCACTTGGGGCCATATTAATGGAAGTGAAGCAAGCCACAACCTTAGCTTCAGTGACCATGCTGGTTTTTCTGCTAGCTGGTGGCTACTACATTCAGAAGATACCATCTTTCATAGCTTGGTTGAAGTACATATCTTTCAGCCACTACTGCTATAAGCTTCTGGTTGGGGTGCAGTATGAAGAAAATGAGGTTTATGAGTGTGGATCCGGGTTTCATTGTAGGGTAATGGATTTTCCTGCAATAAAGTGTCTGGGTGGTCTGGCTCATTTGTGGGCTGATGTGGCTGCACTGTGTGTGATGCTGATTGGATACAGAGTTGTGGCTTATGTGGCTTTGAGGATAAGGCAGCCTCACTGA 2058 0.4913 MMPPEQETTTVQVTPSIPAIPNRLPPENSSVHADPGGSASIEDKPSLDNYVIPLHQLHPSATRSVLHQSLRPVTLKFEDVSYCITFGSKKNGGCFSSQNPKPTRTILNGVTGIVRPGELMAMLGPSGSGKTTLLTALAGRLAGKFTGNITYNGLPFCSSMKRMTGFVLQDDVLYPHLTVLETLVFTALLRLPKSLTREEKVEQAEMVITELGLTRCRNTAVGGGTALFRGVSGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTAAQRIVAMLRGLARHGRTVVTTIHQPSSRLYRMFDKVVVLSDGCPIYAGQSGRVMEYLESIGYPPTFNFMNPADFLLDLANGIVDDVKLDDQNEMHGGLDHIEDQSSVKESLVLSYKKNLYPALKEEIQLKNEGAASSTSGTPRSSENKWNTSWWEQFRVLLKRGLQERRHESYSGLKIFQVLSVSILSGLLWWNSDPSHVQDQLGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTLSYWMGGLKPSLITFMLTLFIIILNVLVSQGIGLALGAILMEVKQATTLASVTMLVFLLAGGYYIQKIPSFIAWLKYISFSHYCYKLLVGVQYEENEVYECGSGFHCRVMDFPAIKCLGGLAHLWADVAALCVMLIGYRVVAYVALRIRQPH 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4963g00061 685 Pfam ABC transporter 107 259 IPR003439 GO:0005524
Pral4963g00061 685 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 59 676 - -
Pral4963g00061 685 MobiDBLite consensus disorder prediction 1 17 - -
Pral4963g00061 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 323 IPR027417 -
Pral4963g00061 685 Pfam ABC-2 type transporter 420 626 IPR013525 GO:0016020|GO:0140359
Pral4963g00061 685 SMART AAA_5 116 308 IPR003593 GO:0016887
Pral4963g00061 685 Gene3D - 94 325 IPR027417 -
Pral4963g00061 685 Pfam ABC-2 type transporter 288 351 IPR043926 GO:0140359
Pral4963g00061 685 FunFam ABC transporter G family member 22 94 325 - -
Pral4963g00061 685 MobiDBLite consensus disorder prediction 1 44 - -
Pral4963g00061 685 ProSitePatterns ABC transporters family signature. 231 245 IPR017871 GO:0005524|GO:0016887
Pral4963g00061 685 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 331 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4963g00061 Pral-Chr4963 515241 518965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4963g00061 101 307 Calmodulin-binding Proteins AT2G36910 30.415 6.64e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4963g00061 K05681 - gmx:100810165 988.408