Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4963g00044 ATGATCTTGCCTTTGTGCAGAGGCCATGCACTTTTACTGCGAAGATTTTTTTCTTATGGATCAGCTGATATTGCTTTTGCTCCGTACGGCGATTATTGGAGACAGATGAGGAAAATATGTACTCTAAAGCTCTTAAGCGCCAAGAAGGTTCAATCATTCTCCCCTATACGACAAGATGAGGTGTCTAAGCTCATAGAGTCAGTTCAATCATCAGTAGGTTCGGTATTAGATCTCACGAGCAAGATTTACTCTTTGACTAGTTCTATAGTTATGAGGGTCGCGATTGGCGACAAGCGTAAAGATGGTGCAGAGCTCGTGAAGTTGCTCCATGAAGTATTGAAAGAGCTGGGTGGGTTTTGCTTTGCTGATTTGTTTTCTTCAAATAAACTTATCCGTCTCATGACTGGAATGGAAGCAAGGTTGTGGAAGATTCATAAGAAAGTAGACAAGGTTTTGGAGGATATTCTCCAGGAGAATCTAAGGAAGCTTAAGAAAGCAGAAGGAAGCGACGATAGTGATTTGGTAGAAGAAAATCTTGCTCAAGTTCTTTTGCGGATCCAGCAAGGTGATCAAAACTTCGATGTCCCAATCACAAGCAACAACGTTAAAGCTGTTATATGGGATATGTTTGGTGGGGGAACCGATACTGCAGCATCAGTATTAGATTGGGCTGTGTCAGACATGATGAGAAATCCAAGAGTGATGGAAAAGGCACAAGATGAGGTTAGAAAGGCTTTTAAAGAAAAGAAAGTAACAATTGATGATAATAGCGAAATGGAAACTTGTGAGATTAAGGGATATGAAATACCCATCAAAACTCAAGTTATAATAGATGCATGGGCACTCGGAAGAGATCCGAATTACTGGTATGATGCTGAGATTTTCATACCAGAGAGGTTCCAATCAGGCAAGTCTGATATTGACTTCAAAGGAACAAACTTTGAGTTCATCCCTTTTGGAGCAGGAAGGAGAATATGTCCGGGAATTCCATTTGGTTTGGCAAGTATTGAGCTTGCTCTGGTTAGCTTACTTTACCACTTTGACTGGGAACTCCCGAATGGAATGAAACCAAAAGATTTAGACATGACGGAAACCCTTGGCGTTACAGCTAGAAGGAAGATTCGTGTTCTGAATTGGTGGATGCATATTGAGATTACATACCCTTGTTTGAATTTTTGTTCTCTACGTGCATTATTGGAGAATCCCAGGATCCTAACTAAGATGACCTTGACCCAGAACTTGAAGAATCCTACTGTATAA 1260 0.4071 MILPLCRGHALLLRRFFSYGSADIAFAPYGDYWRQMRKICTLKLLSAKKVQSFSPIRQDEVSKLIESVQSSVGSVLDLTSKIYSLTSSIVMRVAIGDKRKDGAELVKLLHEVLKELGGFCFADLFSSNKLIRLMTGMEARLWKIHKKVDKVLEDILQENLRKLKKAEGSDDSDLVEENLAQVLLRIQQGDQNFDVPITSNNVKAVIWDMFGGGTDTAASVLDWAVSDMMRNPRVMEKAQDEVRKAFKEKKVTIDDNSEMETCEIKGYEIPIKTQVIIDAWALGRDPNYWYDAEIFIPERFQSGKSDIDFKGTNFEFIPFGAGRRICPGIPFGLASIELALVSLLYHFDWELPNGMKPKDLDMTETLGVTARRKIRVLNWWMHIEITYPCLNFCSLRALLENPRILTKMTLTQNLKNPTV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4963g00044 419 CDD CYP71-like 15 374 - -
Pral4963g00044 419 PRINTS E-class P450 group I signature 201 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4963g00044 419 PRINTS E-class P450 group I signature 221 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4963g00044 419 PRINTS E-class P450 group I signature 326 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4963g00044 419 PRINTS E-class P450 group I signature 316 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4963g00044 419 PRINTS E-class P450 group I signature 278 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4963g00044 419 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 319 328 IPR017972 GO:0005506|GO:0016705
Pral4963g00044 419 Pfam Cytochrome P450 261 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4963g00044 419 Pfam Cytochrome P450 22 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4963g00044 419 Gene3D Cytochrome P450 7 259 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4963g00044 419 SUPERFAMILY Cytochrome P450 15 373 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4963g00044 419 Gene3D Cytochrome P450 260 377 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4963g00044 419 PANTHER OS08G0105600 PROTEIN 10 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4963g00044 Pral-Chr4963 386210 388367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4963g00044 3 373 Cytochrome P450 AT3G26300 35.468 1.35e-84 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4963g00044 - K15472 qsa:O6P43_031352 399.823