Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4963g00031 ATGAAAAGAGAGGACGATTATGGGCAGTGTTCTTCACAAGCAATAAACAACTTCCACAGTTATCAAGAGCAATTACTTCTGCAACAGATGCAGCAACAGAACAGTATGTTTCCGGAGGTTTCTCCGATCCTACAGTCGCCGTGGAACATCCCGCCGGTTCATTCCTTCAACCAGTTTGCGTACGACGGTTCACCTTCCGACCATCTCCGGATCTTATCTGAGGCTCTTGGACCCATGGTTCAGCCCGGTTCTGCTCCATTCGGTCTCCAAGCCGAATTGGGCAAGATGACTGCTCAAGAAATTATGGACGCTAAGGCCCTCGCGGCGTCCAAGAGTCACAGTGAAGCTGAAAGGAGACGCCGAGAGAGAATCAATAACCATCTCGCCAAGCTTCGCAGCTTATTGCCCAGTACGACCAAAACGGATAAAGCATCATTGCTGGCAGAAGTGATTCAGCATGTGAAGGAACTGAAGCGGCAGACGTCGTTAATAGCAGAAACAAGCCCGGTGCCGACGGAGGTCGACGAGCTGACGGTGGACGCCGCCGACGAGGACGACGACGGGAAGGTCGTGATCAAAGCCTCCTTCTGCTGCGAGGACAGGTCAGATCTCTTGCCGGAACTCATCAAGACACTGAAAGCACTAAAGCTGAGAACCCTGAAAGCAGAAATCACCACACTTGGTGGACGCGTGAAGAATGTGTTGTTCATCACCGGGGAAGACGACGGCGATTCACAGAGCAGCGGCGAGCTTCATCATCAGAACCAGATGATGCAGCAACAACAATATTGTATAAACTCGATACAAGAAGCTCTTAGGGCTGTGATGGAGAAGAGTGGCGGTGGAGATGACACAGCAAGTGGGGCTGTTAAGAGACAAAGGACTAATAACCTTAATATCCTCGAACACAGGTCTTTATAA 921 0.5049 MKREDDYGQCSSQAINNFHSYQEQLLLQQMQQQNSMFPEVSPILQSPWNIPPVHSFNQFAYDGSPSDHLRILSEALGPMVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEVDELTVDAADEDDDGKVVIKASFCCEDRSDLLPELIKTLKALKLRTLKAEITTLGGRVKNVLFITGEDDGDSQSSGELHHQNQMMQQQQYCINSIQEALRAVMEKSGGGDDTASGAVKRQRTNNLNILEHRSL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4963g00031 306 CDD bHLH_AtAIG1_like 103 181 - -
Pral4963g00031 306 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 108 157 IPR011598 GO:0046983
Pral4963g00031 306 Pfam Helix-loop-helix DNA-binding domain 111 157 IPR011598 GO:0046983
Pral4963g00031 306 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 112 164 IPR036638 GO:0046983
Pral4963g00031 306 SMART finulus 114 163 IPR011598 GO:0046983
Pral4963g00031 306 FunFam transcription factor bHLH30 103 166 - -
Pral4963g00031 306 Gene3D - 103 164 IPR036638 GO:0046983
Pral4963g00031 306 PANTHER TRANSCRIPTION FACTOR BHLH30 16 299 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4963g00031 Pral-Chr4963 301188 303820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4963g00031 11 301 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 53.352 7.29e-105 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4963g00031 HLH 1.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4963g00031 - - jre:108993280 389.037