Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4963g00029 ATGGCTGGGACATCATGGTTGGTGGACAAAAGTAGAATAGCAACCAAAATAAAGAGTGCTGCTGGGGCATTTGATCCTGAGAAGGTTACATGGAAAAGCAATCCTACCAGAGCTTGTCCAAATTGTCAACACGTTATTGATAACAGCGATGTAGCACAAGAATGGCCTGGATTGCCAAAGGGTGTGAAATTTGATCCATCGGATCAAGATATAATATGCCACTTGCTTGCTAAAGCTGGTGTGGCAAATTCAAGACCTCATCCTTTCATTGATGAATTTATCACTACTCTTGAAGTGGATGATGGAATTTGTTATACTCATCCAAAACACTTACCAGGTGTCCATCAAGATGGAAGTGCAACCCACTTCTTCCATAGAGCAATCAAGGCTTACAATACTGGCAATCGTAAGCGTAGAAAAATACATGGTCAGGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAGAACTAAACCTGTCATGTTGGACGGGGTTCAGAAGGGCTGTAAAAAGATTATGGTTCTTTATATGACCATGGTTAGAGGAGGTAAAGCTGAGAAAACTAATTGGGTTATGCATCAATATCACCTAGGGACACAAGAGGATGAGAGGGAAGGAGAGTATGTTGTTTCTAAGGTTTTCTACCAGCAGCAGCAGGTCAAATCAGGGGATAAGGATGACCTGGATATTCCTGCAAGCACCCTGGATATTCCTGGAAGTACTGAAAACATTGAAGCAACAACTGTGCAAGTTGATCCAGTCACTCCCAAATCAGTGACCCCTGATCCACCTTGTAACAACAAAAGACCACATTCAAACGTTGATTTGGGACTAGAATCGCATGTCACTCCTCAGCATCCTTCAATGGACTGTGAAGAAGATACGTCTCAAGCAGGTTGTGAAGAGCCAAAAACTGACATACTCAAGGAAGAAAATCAAAATAGCAATGAAGGAACAGATAATAATGAAGACGTTGATGTTATTGAAGAACCTAAATGGTGGGACAGTGAGTCACAGCATCTGTTGAATTCACAACAGCTCGTTGAAGCATTGTCCTTGTGTGAGGACCTCTTTCACAGCCAATCTCCCAACAGAGATGACAAGAGTGAAGAACACAAGGACCGACCCAGTCTTTCTGTCTATGCTCAGCTAGGACCAGAGCATCTGAAAAAGGATCTTGAAGAGTGCCAAAATCTTGCCATCGATCCCGCAAATATAGAACTTGATACGCCTCCTGAGTTTCGACTGAGTCAGCTGGAGTTTGGTTCACAAGATAGCTACATTGCCTGGGGTGGCAGCAAGGCAGAGAACTGA 1314 0.4338 MAGTSWLVDKSRIATKIKSAAGAFDPEKVTWKSNPTRACPNCQHVIDNSDVAQEWPGLPKGVKFDPSDQDIICHLLAKAGVANSRPHPFIDEFITTLEVDDGICYTHPKHLPGVHQDGSATHFFHRAIKAYNTGNRKRRKIHGQDFGDVRWHKTGRTKPVMLDGVQKGCKKIMVLYMTMVRGGKAEKTNWVMHQYHLGTQEDEREGEYVVSKVFYQQQQVKSGDKDDLDIPASTLDIPGSTENIEATTVQVDPVTPKSVTPDPPCNNKRPHSNVDLGLESHVTPQHPSMDCEEDTSQAGCEEPKTDILKEENQNSNEGTDNNEDVDVIEEPKWWDSESQHLLNSQQLVEALSLCEDLFHSQSPNRDDKSEEHKDRPSLSVYAQLGPEHLKKDLEECQNLAIDPANIELDTPPEFRLSQLEFGSQDSYIAWGGSKAEN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4963g00029 437 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
Pral4963g00029 437 MobiDBLite consensus disorder prediction 236 267 - -
Pral4963g00029 437 FunFam NAC domain-containing protein 8 67 220 - -
Pral4963g00029 437 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Pral4963g00029 437 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
Pral4963g00029 437 MobiDBLite consensus disorder prediction 220 300 - -
Pral4963g00029 437 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Pral4963g00029 437 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 397 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4963g00029 Pral-Chr4963 237202 242183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4963g00029 5 223 NAC Transcription Factor Family AT4G28500 49.778 8.75e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4963g00029 NAM 1.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4963g00029 - - gmx:100803236 650.973