Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4963g00013 ATGTATCAGAAGGGAAACATGGCTGTCGGTGGCGCCGTGCCGGAAGGGGAATTGGCAGATTGTGTCATGAATATACGTCTTGCAACTGGGGATCATGCTCATTCTGTGGTCGAAAATGGTGCCTTAACATTTGACAAGGACTATGAGCAGTGGGTCAATGAGCATCAAAAACTGATAAACGACCTAAGAACGGCAAGTAATTCGCCAGTGGATAAGGATAATGATGATGATCTGCATAATGTTGTTGAGGGTGTAAGAGCCCACTACGATGAATTATTTAGGTTAAAGAGCAAAGGGACAAAGGCTGATGTATTTCACATGTTCTTTGGCATGTGGAAGACGCCTGCAGAAAGATGCTTTATGTGGTTAGGTGGATTCCGACCATCTGAACTTCTTAAGATATTAAGGAAGCAGCTTGAGCCATTTGCGGGGCAGCAATTGATGGAGCTATATAATCTGCAGCAGTCTTCGATGATGGGGGAGGAAGCTTTATCACAAGGCATGGACGCATTGCAAGGCATTCTCTCTGAGATACTTTCTTCATCTTCAACCTCCCTCGGATCCACCAGTTCTGCAAATTCTGCCAAATACGATATCATGGAACTTGCTAGGAGCAAGCTGCTCAACTTACAGGATTTCCTTCCTGTGGCTGATAATTTGAGGCAGCAAACTCTGCGGCAGTTGCAAAGAATCTTGACCACGCGACAAGCAGCTCGAGCCTTCCTACTCATAAATGATTACATTTCCCAACTACGAAATAATCTTTGTAGGCTCGCTCATCAGAATCAAGTGGCTAAGAGGAAGTGTCGGTCGGAAGAAAAGGGTACACTAATTGCAATCGAGTATCCTGAGGATCATTGTCGTTCAGTGGTTAGAAATGGTGCCTTGGCATTCGACAAGGACTATGAGCACTGGTTAGATGAGCACCAACGTGTGATCAACAATCTAAGAACGGCTTTTAATTCTCAGATGGGAGACAATGATGAACTGCATACTACCATTGTTGCTGTTACATCACATTACGATGAATTATTCAGGTTAAAGAACATAGGCACAAAGGCTGATGTATTTCACATGCTCTCTGGTGCCTGGAAGACGCCTCTCGAAAGATGTTTTATGTGGTTAGCTGGATTCCGATCATCTGATCTTCTCAAGATAGTGAGGGACCAGCTGGAGCCATTAACAGAGGACCAATTGATAGGGTTGTATAATTTGCAGCAGTCTTCGTTTCAGGCTGAGGATGCTTTGTCACAAGCCATGGGAATGTTGCATCAAAATCTTTCAGAGACACTTTCCTCATCAGCAGCCTCCCTCGGACCCACTGGTTGTGGAAATGTTGCCCAACACATGGATCAAATGGCACTTGGTATGAAAAATCTTGACAGTTTGGAAGCAATCCTCCATCAGGCTGATATCTTGAGGCAACAAATTCTGAATCAACAGTTGCCAAGAATCTTGACCATGCGACAAGTAGCACGTGCATTCCTTGTCATAAATGACTACATTTCTCGAATAAGGAATGTAAAATGTGGGAGCTGTCCTGTGATTGATAGTAAACTGTAA 1563 0.4402 MYQKGNMAVGGAVPEGELADCVMNIRLATGDHAHSVVENGALTFDKDYEQWVNEHQKLINDLRTASNSPVDKDNDDDLHNVVEGVRAHYDELFRLKSKGTKADVFHMFFGMWKTPAERCFMWLGGFRPSELLKILRKQLEPFAGQQLMELYNLQQSSMMGEEALSQGMDALQGILSEILSSSSTSLGSTSSANSAKYDIMELARSKLLNLQDFLPVADNLRQQTLRQLQRILTTRQAARAFLLINDYISQLRNNLCRLAHQNQVAKRKCRSEEKGTLIAIEYPEDHCRSVVRNGALAFDKDYEHWLDEHQRVINNLRTAFNSQMGDNDELHTTIVAVTSHYDELFRLKNIGTKADVFHMLSGAWKTPLERCFMWLAGFRSSDLLKIVRDQLEPLTEDQLIGLYNLQQSSFQAEDALSQAMGMLHQNLSETLSSSAASLGPTGCGNVAQHMDQMALGMKNLDSLEAILHQADILRQQILNQQLPRILTMRQVARAFLVINDYISRIRNVKCGSCPVIDSKL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4963g00013 520 Pfam Seed dormancy control 313 388 IPR025422 GO:0006351|GO:0043565
Pral4963g00013 520 Pfam Seed dormancy control 59 136 IPR025422 GO:0006351|GO:0043565
Pral4963g00013 520 PANTHER TRANSCRIPTION FACTOR TGA9 248 508 - -
Pral4963g00013 520 ProSiteProfiles DOG1 domain profile. 295 515 IPR025422 GO:0006351|GO:0043565
Pral4963g00013 520 ProSiteProfiles DOG1 domain profile. 41 261 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4963g00013 Pral-Chr4963 94666 101159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4963g00013 219 506 bZIP Transcription Factor Family AT1G68640 54.325 2.47e-88 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4963g00013 K14431 - pcin:129311019 601.668