Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4963g00012 ATGCAAAGCTTCAAGACCGCTCAATCCACCCCTCAACAACTCTATTGCCACCCCTCCTTCTTTCTTCGGGGGGACGATCTCGCCAGGAATCCTACGCGTTTCTCTGATCTTGGAGACCTTCAACATTCCGTTTCTCCCTTTCAACATGACGATGCTGTTGATTTAAGCACAAGCTCTATGTTTACTGTGAAGTCCAGCAATGTCGCTGTTGTTCCTATTAACTTGCAGTACGGGACATTGAGCTCGAACATCGGGTCTTCAGAAATTGCTTCAACAGGGGCTGGGTGCCTTGATACAGGGCAGCACCTCATGTATCAGAAGGGAATCACTGCTACCGGTACCGCCGTGCCGGTGGGGAACGGACATATGGAGAATTGGGGTGATTCCGGCATGGTAGATAATAGCCAACACACTGACACTTCCACAGATATCGACCCTGACGATAAAAACCAATGTAATAGAGTTCAAACTGGGAGAGCGGTGGTTGCTGATTCCATGGATCAACCTAGAGCCAAACCTGAGGATTCGAAGACTCTTCGTAGGCTCGCTCAAAATCGAGAGGCTGCGAGGAAAAGTCGGTTGAGGAAAAAGGCATATGTACAGCAGTTGGAGAACAGTCGTCTCAGACTAGCACAACTAGAACAAGAGCTCCAACGCGCACGTCAGCAGGGAATGCTTGTTGCAAGTGGATTTCCTGGGGATCATGGTCATTCTATGGTTGGAAATGGTGCCTTAGCATTTGACATGGACTATGCGCGCTGGGTCGATGAGCATCAACAGCTGATAAATGACCTAAGAACGGCTGTTAATTCTCAAATGGGAGATAATGAACTGCATATTGTTGTTGAGGGTGTTACAACACACTACGATGAATTATTCAGGTTAAAAAGCATAGGGGCAAAAGCTGATGTGTTTCACATGCTCTATGGAATGTGGAAGACGCCTGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTCGATCATCTGAACTTCTTAAGATACTGAGGAACCAGCTTGAGCCATTAACAGAGCAGCAGCTGATGGGGTTGTATAATTTGCAGCAGTCTTCGTTGCAGGCTGAGGATGCTTTATCACAAGGCATGGAAGCATTGCATCAATCTCTTTCAGAGACACTTTCCTCAGCCTCCCTCGGACCTACCGGTTCAGGAAATGTTGCCGAGTACATGGGTCAAATGGCACTTGCTATGAGCAAGCTTGCCGCGTTGGAGAGTTTCCTACATCAGGCCGATCTCATGAGGCAACAAACACTGCAACAACTGCAAAAAATCTTGACAACCCGACAAATAGCGCGCGCATTCCTCATGATAAATGACTACATTTCGCGACTACGAGCACTTAGTTCGTTATGGTTAGCTCGCCCTAGAGATTAG 1392 0.4734 MQSFKTAQSTPQQLYCHPSFFLRGDDLARNPTRFSDLGDLQHSVSPFQHDDAVDLSTSSMFTVKSSNVAVVPINLQYGTLSSNIGSSEIASTGAGCLDTGQHLMYQKGITATGTAVPVGNGHMENWGDSGMVDNSQHTDTSTDIDPDDKNQCNRVQTGRAVVADSMDQPRAKPEDSKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGMLVASGFPGDHGHSMVGNGALAFDMDYARWVDEHQQLINDLRTAVNSQMGDNELHIVVEGVTTHYDELFRLKSIGAKADVFHMLYGMWKTPAERCFMWLGGFRSSELLKILRNQLEPLTEQQLMGLYNLQQSSLQAEDALSQGMEALHQSLSETLSSASLGPTGSGNVAEYMGQMALAMSKLAALESFLHQADLMRQQTLQQLQKILTTRQIARAFLMINDYISRLRALSSLWLARPRD 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4963g00012 463 PANTHER TRANSCRIPTION FACTOR TGA9 121 462 - -
Pral4963g00012 463 SMART brlzneu 173 226 IPR004827 GO:0003700|GO:0006355
Pral4963g00012 463 FunFam BZIP family transcription factor 176 225 - -
Pral4963g00012 463 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 180 195 IPR004827 GO:0003700|GO:0006355
Pral4963g00012 463 Gene3D - 176 227 - -
Pral4963g00012 463 CDD bZIP_HBP1b-like 177 229 - -
Pral4963g00012 463 Pfam bZIP transcription factor 177 215 IPR004827 GO:0003700|GO:0006355
Pral4963g00012 463 Coils Coil 196 223 - -
Pral4963g00012 463 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 219 IPR004827 GO:0003700|GO:0006355
Pral4963g00012 463 MobiDBLite consensus disorder prediction 124 151 - -
Pral4963g00012 463 Pfam Seed dormancy control 262 336 IPR025422 GO:0006351|GO:0043565
Pral4963g00012 463 ProSiteProfiles DOG1 domain profile. 244 460 IPR025422 GO:0006351|GO:0043565
Pral4963g00012 463 SUPERFAMILY Leucine zipper domain 177 220 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4963g00012 Pral-Chr4963 74428 77931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4963g00012 3 463 bZIP Transcription Factor Family AT1G68640 60.381 1.78e-173 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4963g00012 DOG1 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4963g00012 K14431 - qsa:O6P43_032773 664.455