Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4961g00010 ATGAGACTCAGCTGCAACGGCTGCCGCATTCTCCGAAAAGGTTGCACCGATAACTGCACCATCCGCCCTTGCCTCCAATGGATCCACTCTCCTGAATCTCAGGCCAACGCCACCCTCTTCCTCGCCAAATTCTACGGCCGCGCTGGCCTCCTCAACCTCCTCGACGCCGCCCCGCCCCACCTCCGCCCAGCTGTGTTCAAGTCGTTGCTGTACGAGTCTTGTGGGAGGATTGTGAATCCGGTGTACGGCTCGGTGGGTTTGTTCTTGACGGGGGAGTGGGATCGCTGCCAGGCTGCCGTCGATGCGGTCATGATGGGGTCGGACATCAGCGGCGCCTCCGCCGGTGGCGTGGCGGTTTCGGATTCGCAAGGGGTTGATCAAGGTTTTGTCGCTGCTTGCGATATACGCCACGTGGCGAGAGAAGGGCAGGTTGTGGAGAAGGAGAAGGAGAAAAGCGAGGCGAACAACATGAAAGGGAGGGGGCGGTTCAAGAGGAACGGGAAGGTGATAAAGCCAAAGGCGCGAGTGGGTTGGGTGGACTCGTCGGCGCTGTGGAAGCCGGTTCAGGAAATGTCAGAGAGCGACAGCGTCTTCTCCGGGGAGACCGTCGAGGCCAGCTTGGCGAACCGGGATGGAGATCAAGATGCGGACCGAGCCGGAAAAGCTCCGCTTAATCTGGACCTGAGCCTTGGAGAATACTAG 702 0.5997 MRLSCNGCRILRKGCTDNCTIRPCLQWIHSPESQANATLFLAKFYGRAGLLNLLDAAPPHLRPAVFKSLLYESCGRIVNPVYGSVGLFLTGEWDRCQAAVDAVMMGSDISGASAGGVAVSDSQGVDQGFVAACDIRHVAREGQVVEKEKEKSEANNMKGRGRFKRNGKVIKPKARVGWVDSSALWKPVQEMSESDSVFSGETVEASLANRDGDQDADRAGKAPLNLDLSLGEY 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4961g00010 233 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
Pral4961g00010 233 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Pral4961g00010 233 MobiDBLite consensus disorder prediction 190 222 - -
Pral4961g00010 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4961g00010 Pral-Chr4961 96666 97456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4961g00010 1 147 AS2 family AT1G67100 60.544 4.83e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4961g00010 LOB 1.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4961g00010 - - pcin:129310290 371.703