Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4958g00056 ATGCTCTCCCGGAAATTATCCGCCTCGCCGTCGTCCCCGGTTGTTTCTGACCCATACCCACCTCCTCTTTCTCAGAATCAGCCGCATCCCTCTTCCAAGTACCACAAAAGCCACCATCTTTTGCCTCCGCTTGTCGCTTCCGCCGCCTCTGTGTGCTCCTTCTTCCTTCTCTTTTTCCTCTGTTTTCGCAGACTCGCGAGAAAACGCACAACCCCTTCTTCTGATTCTGAGTCTAAGCCTCCTTATCGTTTCTCGTATTCCCTCCTCCGCCGTGCCACGTCATCCTTCTCCACCCGCCTCGGCCAAGGCGGCTTCGGCCCCGTCTACTCCGGTACTCTGCCTCCGACCCGACAACCCATCGCCGTCAAGCTCATGGACTCTGCTTCTCTCCAGGGTGAGCGCGAGTTTCACAACGAGCTTTTCTTCGCCTCTAGGCTTCACTCTCAGCACGTGGTTTCCGCCATCGGCTTTTCCTCTGACAGAAATCGACGGAGGTTTTTGCTTGTCTATGAGTTGATGCATAATGGGAATCTCCAAGACGCGCTCTTGCACCGCAAGTGCCCTGAGCTGTTGGATTGGAAGAAGCGGTTTTCCGTCATCGTCGACATAGCCAAAGGGATTCAGTATCTTCACTCTTGCGACCCACCCGTGATTCACGGCGATATAAAGCCCAGTAATATTCTCTTAGACCGTTCTTTAACTGCAAAAATTGGGGATTTCGGACTTGCACGGTTGAAATCGGAACCCCAGATTGAAAATGGGATTCTGAACTTAGACGGTATTGAAAAGAAGAATGGTGGATTGGAGTTAGAAGAGGAGAAGAAGGGTAAGGAAGAAGAATTAGAGAGTAATGGTGGGTCATTGATTGAAGAAACACAGAGCGTCAATACCGTTGACGAAGATAGCTTAGCTGCGGATCAATCTCCGGAGGGTTTTGTCAGGATACCCATATCTTGCGATCCAACCGTGATTCACGGCGATATAAAGCCCAGTTCTTTAACGGCGAAAATTGGCGATTTCGGGCTTGCACGGTTGAAATCGGAACCCCAGATTGAAATTGGGATTTTGAACTTAGATGGTATTGAAAAGAAGAATGATGGGTTGGAGTTAGAAGACGAGAAGGGTAAAGAAGAAGAATTAGAGAGTAATGGTGGGTCATTGATTGAAGATACACAGAGCGTCAATACCGTTGACGAAGGTAGCGTAGCTGCGGATCAATCTCCGGAGGGTTTTGTCAGGATACCCATATCGGAGCCGTCCCCGCCTCCAATGGAGGTGGCGACGGGAGCGTCACCTTCGGAGGCGAATTTCGACAAAGTAAGCGTTCAGAGCGAGATAAACATTTCCTTGAGTTCTAAGAAAAGCGGAAAAGTCTTAAAGAGCAATTCCATGAAGGATTGGTGGTGGAAACAAGACGTGGAAGAAGCAGCCTCCCCCATGGGTGAGCATAAGAAAGTGAAGGATTATGTAATGGAGTGGCTTGGAAGAGAAATAAGCAAAGAAAGACCCAAGAGCGAATGGGTTGCGGCAGAGGTGGCAGCAGCAGCTACCTCCAGTAGTGGAGCAACAATGGAGAAAACAGAGAAAAAGAAGAGCAAGAGGCGCTTGGAATGGTGGAGATCAATGGACAAGGAAGCCATTAATCCTAAAGCTCTGAAGAAGGAGAAGAGAAGACCAGCGAGAGAATGGTGGAAAGAAGAGTACTGTGAAGAGCTTGCAAAGAAAAAGAAGAAGAAGAAGAAGAAACAGCAGCAAAAGAGAAATGGAATAAACAGTGACGATGATTGGTGGGTAAGAGACGCCGAAGATTTATATGGAGAAAGGAAAAAGGCCAAAACCCGTAAAAACAGTCGTGGTAATTTAGATTCATGGTTAGATGGATTCAGCGGTGAGTTATTCAGAGCTCGAAGAAACAGCCATGATTCTGCAGCAAGCTGGGAAATTCCCAAGAATGGTGGTGTTAGTAGTACCCCAAGCATGAGAGGAACAGTTTGTTATGTTGCTCCTGAATATGGTTTTGGTGAAGATTTATCTGAGAAGTGTGATATATATAGTTTTGGGGTTCTATTACTTGTTATAGTTTCTGGACGACGTCCACTCCAAGTGACTGGTTCGCCATTATCGGAGTTTCATAAAGCAAATCTACTATCATGGGCACGCCATTGTGCACGCAATGGGAAGCTACTTGATCTGGTTGATCCGTCTATTAAGTCATTAGATAAGGATCAAGCTCTTCTCTGCATCACTATTGCTCTTCTTTGTTTGCTCAAGACACCTTCTCGTCGTCCTTCAATGAAAGAGGTTGTGGGAATGCTTAATGGTGAACTTGAGCCACCACAGTTACCAGTTGAGTTTTCACCATCGACCCCGTCTCGCTTCCGATCCCAGGCTCGCAGAAAGGGTCCCTAA 2409 0.4741 MLSRKLSASPSSPVVSDPYPPPLSQNQPHPSSKYHKSHHLLPPLVASAASVCSFFLLFFLCFRRLARKRTTPSSDSESKPPYRFSYSLLRRATSSFSTRLGQGGFGPVYSGTLPPTRQPIAVKLMDSASLQGEREFHNELFFASRLHSQHVVSAIGFSSDRNRRRFLLVYELMHNGNLQDALLHRKCPELLDWKKRFSVIVDIAKGIQYLHSCDPPVIHGDIKPSNILLDRSLTAKIGDFGLARLKSEPQIENGILNLDGIEKKNGGLELEEEKKGKEEELESNGGSLIEETQSVNTVDEDSLAADQSPEGFVRIPISCDPTVIHGDIKPSSLTAKIGDFGLARLKSEPQIEIGILNLDGIEKKNDGLELEDEKGKEEELESNGGSLIEDTQSVNTVDEGSVAADQSPEGFVRIPISEPSPPPMEVATGASPSEANFDKVSVQSEINISLSSKKSGKVLKSNSMKDWWWKQDVEEAASPMGEHKKVKDYVMEWLGREISKERPKSEWVAAEVAAAATSSSGATMEKTEKKKSKRRLEWWRSMDKEAINPKALKKEKRRPAREWWKEEYCEELAKKKKKKKKKQQQKRNGINSDDDWWVRDAEDLYGERKKAKTRKNSRGNLDSWLDGFSGELFRARRNSHDSAASWEIPKNGGVSSTPSMRGTVCYVAPEYGFGEDLSEKCDIYSFGVLLLVIVSGRRPLQVTGSPLSEFHKANLLSWARHCARNGKLLDLVDPSIKSLDKDQALLCITIALLCLLKTPSRRPSMKEVVGMLNGELEPPQLPVEFSPSTPSRFRSQARRKGP 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4958g00056 802 SMART serkin_6 94 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4958g00056 802 FunFam Os07g0541700 protein 173 257 - -
Pral4958g00056 802 Gene3D Phosphorylase Kinase; domain 1 82 172 - -
Pral4958g00056 802 Coils Coil 565 585 - -
Pral4958g00056 802 SUPERFAMILY Protein kinase-like (PK-like) 322 789 IPR011009 -
Pral4958g00056 802 MobiDBLite consensus disorder prediction 1 36 - -
Pral4958g00056 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Pral4958g00056 802 MobiDBLite consensus disorder prediction 777 802 - -
Pral4958g00056 802 Pfam Protein tyrosine and serine/threonine kinase 96 246 IPR001245 GO:0004672|GO:0006468
Pral4958g00056 802 Gene3D Transferase(Phosphotransferase) domain 1 635 779 - -
Pral4958g00056 802 Gene3D Transferase(Phosphotransferase) domain 1 173 260 - -
Pral4958g00056 802 PANTHER OS07G0586332 PROTEIN 318 800 IPR044576 -
Pral4958g00056 802 SUPERFAMILY Protein kinase-like (PK-like) 72 250 IPR011009 -
Pral4958g00056 802 ProSiteProfiles Protein kinase domain profile. 94 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4958g00056 Pral-Chr4958 786217 789196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4958g00056 650 769 Receptor kinase-like Gene Family AT3G58690 35.200 1.03e-11 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pral4958g00056 PK_Tyr_Ser-Thr 7.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4958g00056 - - qsa:O6P43_005511 548.51