Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4958g00055 ATGTTTCCTTTACAACGCGGCAATGAGCTGGTGATCCAGTTTTCCAGGAGTCCGGATCCTCAGAACCACCAAAGCAAGATCTCAGAAGATCCGATTCTGGATGATTATGCTTCTCCTCGTGTCAGCAATTCAGATAAAAAAATTGGTAACACCGCAAGAGGGAATATACTTTCTCAGGCTATTAGCAATAATAATAGTCCCAACGAAAACAAGAAGAAGAAGAAGATTCACAGAGAGATTGAGAGGCAAAGGAGGCAAGAAATGGCTTCCCTTTATGCTTCCCTCAGATCCCTTCTTCCTCTTGAGTACATCAAGGGAAAGCGATCGATATCAGATCACATGAATGAGGCAGTGACTTATATAAAGCACCTACAGAAGAAAATTAAAGAACTTGACGATAAGAGAGATGAACTGAAGAAACACTCATCAGATAATTCTAACTTGGAAACCCCAGATGACGGCCAACAGAAATGGGTAAGCTTCACTGTCCATGAGAATAATGGTGTTGTGGGAATCGAAATTATCAGTAACTTCAAAGATGAAAGGTTCTTACTCTCAAAGTTGCTGGAATTACTGCTTGAAGAAGGACTTGAAGTTGTTACTTGTCTCTTTACCCAAGTCAATGGTAGAATACTTCATAGTCTCCACTGTGAGGTTAACCGTTCCAATAGTGTAGATCTATCTGAGCTGAGAAAGAAAATTGCAAGTTTCATTTCTTAG 720 0.4014 MFPLQRGNELVIQFSRSPDPQNHQSKISEDPILDDYASPRVSNSDKKIGNTARGNILSQAISNNNSPNENKKKKKIHREIERQRRQEMASLYASLRSLLPLEYIKGKRSISDHMNEAVTYIKHLQKKIKELDDKRDELKKHSSDNSNLETPDDGQQKWVSFTVHENNGVVGIEIISNFKDERFLLSKLLELLLEEGLEVVTCLFTQVNGRILHSLHCEVNRSNSVDLSELRKKIASFIS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4958g00055 239 FunFam Transcription factor bHLH126 64 151 - -
Pral4958g00055 239 MobiDBLite consensus disorder prediction 13 27 - -
Pral4958g00055 239 CDD bHLH_AtORG2_like 73 149 - -
Pral4958g00055 239 MobiDBLite consensus disorder prediction 13 50 - -
Pral4958g00055 239 SMART finulus 78 130 IPR011598 GO:0046983
Pral4958g00055 239 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 62 237 - -
Pral4958g00055 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 142 IPR036638 GO:0046983
Pral4958g00055 239 Pfam Helix-loop-helix DNA-binding domain 74 125 IPR011598 GO:0046983
Pral4958g00055 239 Coils Coil 114 144 - -
Pral4958g00055 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 124 IPR011598 GO:0046983
Pral4958g00055 239 MobiDBLite consensus disorder prediction 58 77 - -
Pral4958g00055 239 Gene3D - 62 150 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4958g00055 Pral-Chr4958 763077 764373 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4958g00055 77 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 43.713 8.28e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4958g00055 HLH 6.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4958g00055 - - gmx:100780888 238.424