Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4958g00052 ATGGAATCTGTCTCCACCCCTTATCGCATTGCAGAGGAGAATATTTGCACAAAACTCATCAAAGAAATGCCCGCCAAGTGTTTTTGTTGCTTCCTCCTACAAGCAGAAAACCAGCAAGTCAAAACAAGAAATGACAGCAAAAATAGGGACTATCCATGGGAAATGTACACGCTGAAGGAGTTGCTTCGTGCAACAAACAATTTCCATCAAGATAGCAAGATAGGAGAAGGTGGCTTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCATCGAGATTGCAGTGAAGCGACTGAAGACGATGACTGCAAAAGCAGAAATGGAATTTGCAGTAGAAGTGGAAGTACTTGGAAGGGTGAGGCATAAGAACCTTTTGGGTCTAAGAGGATTCTACGCAGGAGGAGAAGAAAGACTTATTGTTTACGATTACATGCCCAATCATAGCTTGCTCACACATCTTCACGGCCACCTCGCTTCAAGTTGTCTCCTAGATTGGCCTAAAAGAATGAGCATCGCCATTGGAGCAGCTGAAGGCTTAGCGTATCTTCATCATGAGGCGAATCCTCATATCATACACAGGGATATAAAGGCAAGCAACGTTCTATTGAACACAGAGTTTGAAGCGAAAGTAGCTGATTTTGGTTTTGCGAAGCTAATACCAGAAGGTGTGAGCCATTTGACCACAAGGGTGAAAGGAACTTTGGGATATTTGGCGCCAGAATACGCCATGTGGGGGAAGGTTTCAGAGAGCTGTGATGTGTATAGTTTTGGGATTTTGCTTTTGGAGATTATTAGTGCGAAGAAACCGATAGAGAAGCTACCAGGAGGAGTGAAAAGGGACATAGTTCAGTGGGTGACACCTTATGTTCAAAAGGGTATCTTCAATCATATTGCAGATCCAAAGTTGAAGGGTAGGTTTGACTTGGAGCAGTTGAAATCCCTGGTGATGCTGGCTGTGAAGTGCACCGATAGTAGCCCGGAGAAGCGGCCGAGTATGGCGGAGGTGGTGGAGTGGCTCAAGGGCGCCGGAGGCGGAGGTGGGAGGAGGAGAAAAGAGATTCCGCCGGCAGCTATGAGGGATGAAGAAAATGACAGGAATGATAAGGACTATGAAGACATGGGAAAGAGGCAATCCATGTTGAGAATACCAAGCGATAGATATAAAATAAGATGA 1173 0.4527 MESVSTPYRIAEENICTKLIKEMPAKCFCCFLLQAENQQVKTRNDSKNRDYPWEMYTLKELLRATNNFHQDSKIGEGGFGSVYWGRTSKGIEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGHLASSCLLDWPKRMSIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLNTEFEAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGVKRDIVQWVTPYVQKGIFNHIADPKLKGRFDLEQLKSLVMLAVKCTDSSPEKRPSMAEVVEWLKGAGGGGGRRRKEIPPAAMRDEENDRNDKDYEDMGKRQSMLRIPSDRYKIR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4958g00052 390 FunFam PTI1-like tyrosine-protein kinase At3g15890 144 351 - -
Pral4958g00052 390 ProSitePatterns Protein kinases ATP-binding region signature. 74 96 IPR017441 GO:0005524
Pral4958g00052 390 ProSiteProfiles Protein kinase domain profile. 68 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4958g00052 390 Gene3D Transferase(Phosphotransferase) domain 1 144 343 - -
Pral4958g00052 390 SMART serkin_6 68 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4958g00052 390 MobiDBLite consensus disorder prediction 342 390 - -
Pral4958g00052 390 SUPERFAMILY Protein kinase-like (PK-like) 49 341 IPR011009 -
Pral4958g00052 390 PANTHER OS01G0253100 PROTEIN 42 341 - -
Pral4958g00052 390 FunFam PTI1-like tyrosine-protein kinase At3g15890 39 143 - -
Pral4958g00052 390 Pfam Protein kinase domain 68 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4958g00052 390 MobiDBLite consensus disorder prediction 344 390 - -
Pral4958g00052 390 Gene3D Phosphorylase Kinase; domain 1 31 143 - -
Pral4958g00052 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4958g00052 Pral-Chr4958 718012 725188 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4958g00052 56 370 Receptor kinase-like Gene Family AT1G60800 41.590 1.15e-81 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pral4958g00052 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4958g00052 - - gmx:100817283 604.749