Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4958g00008 ATGTCGCATGAAGGTCATGAGGAAGAAGAGAACATGGCTGCTTGGCTTGTTAGTATAAATACTCTCAAGATTCAACCTTTCAAGCTGCCGCCTCTGGGCCCCCATGATGCCAGAATTCGAATCAAAGCTGTTGGTATCTGTGGCAGTGATGTTCACTACTTCAAGAAAATGAGGAATGCACATTATGTAATGAAAGAACCCATGGTAATGGGCCATGAGTGTGCAGGGATCATAGAAGAAGTTGGCAGTGAAGTAAAGAATGTGGTACCTGGTGACCTTGTGGCAATTGAACCTGGAATTAGCTGCTCACATTGTGACCTCTGCAAACAAGGTCGATATAACTTGTGCCCCAATATGAAGTTCTTTGCTAGTCCACCAGTTCATGGTTCTCTTGCTAATCAGATAGTGCATCCTGCAAACCTATGTTTCAAATTGCCAGACAACGTGAGCTTGGAGGAGGGGGCAATGTGTGAACCTTTGAGCGTTGGTGTTCATGCGTGTCGCCGGGCTAATATTGGACCAGAAACAAATGTGTTGATCATGGGAGCAGGACCAATTGGACTTGTCACAATGCTCTCAGCTCGTGCTTTTGGGGCACCCAGGATCATCATTGTGGACGTGGATGAGCATCGTTTATCTGTTGCAGAATCTCTTGGTGCAGATGAGACTGTTAAAGTTTCGGCAAAAATTGAGGAAGTGAGTGAAGAAGTTGTAGAGATACAAAAGGCAATGAGAAGTAGGGTGGATGTTAGCTTTGATTGTGCAGGCTTCGACAAAACTATGACCACTGCATTGAGTGCTACCCGTGCAGGTGGCAAAGTGTGCCTCGTGGGAATGGCACAGGCTCAAATGACTGTTCCACTCACGCCTGCTGCTGCAAGGGAAGTTGATGTGATTGGGATTTTCCGTTACAAGAACACATGGCCTCTGTGTCTGGAGTTTTTGAGGAGTGGGAAGATAGATGTGAAGCCCCTTATAACTCACAGGTTTAGGTTCTCTCAGAAGGAGGTTGAAGAGGCCTTTGAAACCAGTGCCCGTGGTGGCAATACTATCAAGGTTATGTTCAACCTATAG 1074 0.4618 MSHEGHEEEENMAAWLVSINTLKIQPFKLPPLGPHDARIRIKAVGICGSDVHYFKKMRNAHYVMKEPMVMGHECAGIIEEVGSEVKNVVPGDLVAIEPGISCSHCDLCKQGRYNLCPNMKFFASPPVHGSLANQIVHPANLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLSARAFGAPRIIIVDVDEHRLSVAESLGADETVKVSAKIEEVSEEVVEIQKAMRSRVDVSFDCAGFDKTMTTALSATRAGGKVCLVGMAQAQMTVPLTPAAAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFRFSQKEVEEAFETSARGGNTIKVMFNL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4958g00008 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 148 321 IPR036291 -
Pral4958g00008 357 Gene3D - 162 302 - -
Pral4958g00008 357 PANTHER SORBITOL DEHYDROGENASE 9 357 - -
Pral4958g00008 357 Pfam Zinc-binding dehydrogenase 185 315 IPR013149 -
Pral4958g00008 357 FunFam Sorbitol dehydrogenase 162 302 - -
Pral4958g00008 357 SMART PKS_ER_names_mod 17 355 IPR020843 GO:0016491
Pral4958g00008 357 Pfam Alcohol dehydrogenase GroES-like domain 34 145 IPR013154 -
Pral4958g00008 357 Gene3D - 21 344 - -
Pral4958g00008 357 CDD sorbitol_DH 13 356 IPR045306 GO:0016616
Pral4958g00008 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Pral4958g00008 357 SUPERFAMILY GroES-like 11 183 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4958g00008 Pral-Chr4958 108626 112680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4958g00008 24 290 Monolignol Biosynthesis Gene Families AT4G37980 26.619 2.31e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4958g00008 K00008 - qsa:O6P43_008278 607.446