Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4955g00017 ATGCCGCTTTCACCTGCCCCTCAAGTCATCACCTGCAAAGCTGCAGTGGCATGGGGACCTGGAGAGCCATTGGTAGTAGAGGAAGTTGAAGTGAACCCTCCCCAACCTTCGGAGATTCGGATTAAAGTTGTCTCCACCTCTCTCTGTCGCAGCGATATCTCCGCTTGGGAATCCCAAACCTTATTTCCTCGAATATTTGGTCATGAAGCGTCAGGGATTGTTGAGAGCGTGGGCGAGGGAGTGACTGAATTCAAGGAGGGAGACCATGTGCTGACTGTCTTCATTGGAGAATGCATGACATGCAGGCTGTGCAGATCTGGGAAAACAAACGTATGTCAAGTTCTGGGATTGGAAAGAAGAGGTTTAATGCATAGTGATCAGAAAACACGTTTCTCAGTAAAAGGGAAGCCTGTTTATCACTATTGTGCTGTCTCAAGTTTCAGTGAATATACAGTAGTGCATTCTGGGTGTGCAGTCAAAGTCAGCTCCAATGCTCCTCTTGAGAAAATATGCCTTTTGAGCTGTGGTGTTGCTGCAGGTCTGGGCGCTGCATGGAATGTTGCTAATATATCAGAAGGATCAACAGTAGTGATATTTGGACTGGGAACTGTTGGCCTTTCTGTTGCGCAAGGTGCTAAACTTAGGGGGGCATCTCGAATAATTGGTGTGGACAACAACCCTCAGAAGTGTGAAAATGCTAAAGCTTTTGGAGTTACAGAAGTTGTTAACCCAAATTCCTTTGATGAACCTATCGCACAGGTTATTAAGCGCATGTCCAATGGTGGAGCTGATTTCTCTTTTGAATGCGTCGGTGATACTGATATGATAACCACTGCATTGCAGTCATGCTGTGATGGATGGGGTTTGACTGTTACCCTTGGTGTGCCAAAAGTGAAGCCTGAGATGTCAGCTCACTATGCACTGTTATTAATGGGAAGAACATTGAAAGGATCTTTGTATGGAGGATGGAAACCCAAATCGGATTTGCCTTCATTAGTTGAGAAGTATGTGAATAAGGAGATCGAGATTGACGATTACATAACGCACGATTTGCCATTTAACGAAATTAACAAAGCTTTCAATCTCATGAGGGAAGGAAAGTGTCTGCGCTGTGTTATCCACATGCCCAGGTAA 1134 0.4506 MPLSPAPQVITCKAAVAWGPGEPLVVEEVEVNPPQPSEIRIKVVSTSLCRSDISAWESQTLFPRIFGHEASGIVESVGEGVTEFKEGDHVLTVFIGECMTCRLCRSGKTNVCQVLGLERRGLMHSDQKTRFSVKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSNAPLEKICLLSCGVAAGLGAAWNVANISEGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPQKCENAKAFGVTEVVNPNSFDEPIAQVIKRMSNGGADFSFECVGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYALLLMGRTLKGSLYGGWKPKSDLPSLVEKYVNKEIEIDDYITHDLPFNEINKAFNLMREGKCLRCVIHMPR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4955g00017 377 FunFam Alcohol dehydrogenase 6 15 193 - -
Pral4955g00017 377 Pfam Zinc-binding dehydrogenase 204 325 IPR013149 -
Pral4955g00017 377 SUPERFAMILY GroES-like 328 374 IPR011032 -
Pral4955g00017 377 SUPERFAMILY GroES-like 7 185 IPR011032 -
Pral4955g00017 377 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 318 - -
Pral4955g00017 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 339 IPR036291 -
Pral4955g00017 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Pral4955g00017 377 Gene3D - 180 318 - -
Pral4955g00017 377 Pfam Alcohol dehydrogenase GroES-like domain 37 160 IPR013154 -
Pral4955g00017 377 PANTHER ALCOHOL DEHYDROGENASE 8 373 - -
Pral4955g00017 377 Gene3D - 15 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4955g00017 Pral-Chr4955 150445 154459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4955g00017 38 175 Monolignol Biosynthesis Gene Families AT4G37980 26.056 1.09e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4955g00017 K00001 - gmx:100819938 674.855