Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4955g00009 ATGGCAAGTCGAGAACTACTATCCCCCTCCTTTGCCGGTGAATGGACTTACGATGTATTCCTTAGCTTTAGAGGTGAAGATACCCGCACCAATTTTACTGGCCATCTCTACAATTCTCTAAAACAAAAGGGTGTTCAAACCTTCATCGATGATGTGGGTCTCCAAAGAGGGGAAGAAATCACTCCAGCTCTTCTCGAAGCCATCCGACAATCGAGGATTGCCGTCATTGTTTTCTCCAAAAATTATGCATCCTCTACTTTCTGCCTTGATGAACTTGTCAACATACTTCACTGCGTCAGAGGAGAAGGTCGGTTGGTCTGGCCGGTGTTCTACGATGTTGATCCATCAGATGTCCGACACCAGCGTGGGAGTTACGGACAGGCGTTGGCAAAACACGATGATCGATTCCAAGCCAACAAGGAGAAAGTGAGGAAGTGGAGGGAGGCTTTATGTGTGGCGGCTAACTTATCTGGCTGGCATTTCCAACATGGATCTCAACCTGAATATGAATTTATAAGTGGGATCATTGAAGAGGTATCCAAAAAGATCAATCGCGTTCCTTTACATATAGTTAATCACCCTGTTGGACTGGAATCGTCCGTTCAAGAAGTGATCTCACTTCTGGAACTTGAGTCTGATAAGGGGATTAACATGGTAGGGATATGTGGAATCGGTGGAGTAGGTAAAACAACAGTTGCACGGGCTGTTTATAACCTTATCGGTGATCAATTTGAAGGTCTATGCTTTCTTGCTGATATTAGACAGAAGGCTATTGGCGTGCATGGACTTGTGCAACTTCAAGAGACGCTACTTTCTCAAGTAGTTGCAGAAAAAGATCTCAGGCTTGGAGATGTTCATAGCGGAATTTCAATCATAAAAAGAAGGCTCCGCCGGAAGAAGGTTCTTTTGATTCTTGATGATATTGATAAGCTTAAACAGTTGCAGGTACTTGCCGGAGGACGTGGTTGGTTTGGATCTGGCAGTAGGATCATTGTCACGACAAGAGATAAACATTTGCTTAGTACTCATGGGGTAGAAAAATTATATGAGGTGAAGGGGCTAAATTTCAATAAATCCCTAGAATTGCTGAGCTGGAATGCCTTTAAGAATAACATCGTTGATCCACATTACATGGACGTTTCTAAACGTGCAGTCTCCTATGCTGGTGGCCTTCCGTTGGCTTTGGAAGTAATAGGGTCTGACCTATTTGATAGAAGTATAGAAGAATGGAATTCTCAGCTAGACAAGTACGCAAGAACCCCTCATGAAGATGTCCATGAAATCCTGAAAGTAAGCTATGATAGTTTGCAAGAGAATGAGAAGAAAATTTTCCTTGATATTGCTTGTTTCTTTAATAAATTAGAACTGACTTACACCAAGGAAATACTGTGTGCACATGGCTTACACGGAGACATTGGAATTAGAATCTTACTGGAGAAATCTCTCATCAAGATCGATAGTTCAAACTGTGTGAGAATGCACGACTTAATTCAAGACATGGGCAGAGAAATTGTTAGACTGGAATCAACATCTGAGCCTGGCAAGCGTAGTAGGTTGTGGCTTGATGAGGACATTGTTCATGTTTTGGAAGAAAACACGGGAAGTGAGAAAATTGAAGTCATAATGATTCACTCATGCAAATATAAAGAAGTGCAATGGAGTGGAGTGGCATTCGAGAAGATGAAAAACCTGAGAATCCTTATTATTGAAAATGTACGCTTTTCCAGAGGCCCCGAATATCTCCCTAATACTTTGAGAGTATTGGACTGGAGTGGATATCCGTCATCATCTTTACCATCTGATTTTAACCCCAGGAATCTTCTCATACTCAGCCTACCTGAATGCTGCCTTCAATTTTTCAAACCACCAAAGGTGTTTCATTCTTTATGTCTCATGGATTTTGAAGGTTGTAAATTCTTAACACGAGTACCTAAGCTATCTGGACTGCCTAACTTGGGAGCGTTGTGTCTTGATAATTGTACAAATCTGATTAGTATTCACGAATCAATTGGGTTTCTTGATAGGCTCAGATTGTTGAGTGCCCAAGGTTGCACTCAGCTTGAAATGTTAGCAACTCGCATCAATATGACTTCTCTTGAGACTCTGGATCTCAGGGGTTGCTCAAGTCTTTGGGAGTTCCCAGAAGTACTGGGACTCATGGAGAATACAAGAGACATTTATTTGGATCAGACTGCCATAAAAGAACTTCCAGTTTCAATTGGAAACCTTATTGGATTGAAACGGCTATACTTGAGGCGTTGTCCACAGCTTAGACAGCTACCAGGCAGCATATCCATGATCCCCAAACTCGAGGTGGTGCTGGCTTACAGGAGCAGAGGATTTCAATTATTTAGAGGGTATGAAATTCAAGAAAAACAGAGGTCCGAAGCGTCTTTGGCCACGATTCCACTCTATTCTCTACCAGATTCTAGCAATCAAAGTATAAGGTACGCTAATTTCGATTGCTGCCTTAATGGGTACTGTATAAGCAAAAGCGAAACAAATTTCGTTCAAATATTTCCTCTTCCACAAACTTCGGTTGGTTGTGCTCGGTTTTCCAGGACTAGCATCGGATGTCCTCCTTTTGGGGACCGCCCTACTACCCTCCCATTGTTGAAGAACCAAAAGACAACATTAAGAGCCTGCTGTGCAAGCAGCGAATCATCAGTTTCTTTCTGGTTCTGTGAGAATTTCCCAAAGATAGCCATATGTGTGATTGGGGCATCAGGCACAGAAATAGAGCCCGCAATCTTGGACATTAGGCTGAGAGTGTTTGTCAATGGTTCTGAACAACTTGTTTATTTGTGTAATTACATAATTTATGAACAAAAAATGGCAAAACATATGATTTGGTGTGGCTTGCGATGCAAACACAATAGGGTGATTTCAACACATAAATGGAATCATGTTCAGGTTTCGTGGGAGTTGAAATACCTCAGGCCTTATGATCCTCGTAGGGTAATTTCAGACGACAATGGAATCCCAACAATCGAAATAGATTTGTCTGCAATTCATGTCTATGAGAAAGAAAGCAGCAGCATTGACAATATGCGGTTCACAAACCCTGATATTTCTCTGTCTCAGGTTGAAACGATGAGAAATAACCATATAATCTATTTTCAGGGCACATCGTCCTACTGGGATAGCGGGTTGCTCAACCTGATGGAAGGTACCATCTTTTTCTCTAGCTTGATTTAA 3198 0.4184 MASRELLSPSFAGEWTYDVFLSFRGEDTRTNFTGHLYNSLKQKGVQTFIDDVGLQRGEEITPALLEAIRQSRIAVIVFSKNYASSTFCLDELVNILHCVRGEGRLVWPVFYDVDPSDVRHQRGSYGQALAKHDDRFQANKEKVRKWREALCVAANLSGWHFQHGSQPEYEFISGIIEEVSKKINRVPLHIVNHPVGLESSVQEVISLLELESDKGINMVGICGIGGVGKTTVARAVYNLIGDQFEGLCFLADIRQKAIGVHGLVQLQETLLSQVVAEKDLRLGDVHSGISIIKRRLRRKKVLLILDDIDKLKQLQVLAGGRGWFGSGSRIIVTTRDKHLLSTHGVEKLYEVKGLNFNKSLELLSWNAFKNNIVDPHYMDVSKRAVSYAGGLPLALEVIGSDLFDRSIEEWNSQLDKYARTPHEDVHEILKVSYDSLQENEKKIFLDIACFFNKLELTYTKEILCAHGLHGDIGIRILLEKSLIKIDSSNCVRMHDLIQDMGREIVRLESTSEPGKRSRLWLDEDIVHVLEENTGSEKIEVIMIHSCKYKEVQWSGVAFEKMKNLRILIIENVRFSRGPEYLPNTLRVLDWSGYPSSSLPSDFNPRNLLILSLPECCLQFFKPPKVFHSLCLMDFEGCKFLTRVPKLSGLPNLGALCLDNCTNLISIHESIGFLDRLRLLSAQGCTQLEMLATRINMTSLETLDLRGCSSLWEFPEVLGLMENTRDIYLDQTAIKELPVSIGNLIGLKRLYLRRCPQLRQLPGSISMIPKLEVVLAYRSRGFQLFRGYEIQEKQRSEASLATIPLYSLPDSSNQSIRYANFDCCLNGYCISKSETNFVQIFPLPQTSVGCARFSRTSIGCPPFGDRPTTLPLLKNQKTTLRACCASSESSVSFWFCENFPKIAICVIGASGTEIEPAILDIRLRVFVNGSEQLVYLCNYIIYEQKMAKHMIWCGLRCKHNRVISTHKWNHVQVSWELKYLRPYDPRRVISDDNGIPTIEIDLSAIHVYEKESSSIDNMRFTNPDISLSQVETMRNNHIIYFQGTSSYWDSGLLNLMEGTIFFSSLI 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4955g00009 1065 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 778 IPR044974 GO:0006952
Pral4955g00009 1065 SUPERFAMILY "Winged helix" DNA-binding domain 424 530 IPR036390 -
Pral4955g00009 1065 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Pral4955g00009 1065 SMART AAA_5 215 354 IPR003593 GO:0016887
Pral4955g00009 1065 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Pral4955g00009 1065 SUPERFAMILY L domain-like 549 778 - -
Pral4955g00009 1065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Pral4955g00009 1065 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
Pral4955g00009 1065 Gene3D Ribonuclease Inhibitor 694 782 IPR032675 -
Pral4955g00009 1065 Gene3D Ribonuclease Inhibitor 536 693 IPR032675 -
Pral4955g00009 1065 SMART till_3 16 156 IPR000157 GO:0007165
Pral4955g00009 1065 Pfam TIR domain 17 185 IPR000157 GO:0007165
Pral4955g00009 1065 Gene3D - 181 347 IPR027417 -
Pral4955g00009 1065 Gene3D - 13 180 IPR035897 -
Pral4955g00009 1065 Pfam NB-ARC domain 198 437 IPR002182 GO:0043531
Pral4955g00009 1065 PRINTS Disease resistance protein signature 218 233 - -
Pral4955g00009 1065 PRINTS Disease resistance protein signature 295 309 - -
Pral4955g00009 1065 PRINTS Disease resistance protein signature 388 402 - -
Pral4955g00009 1065 PRINTS Disease resistance protein signature 694 710 - -
Pral4955g00009 1065 Gene3D - 353 437 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4955g00009 Pral-Chr4955 123453 127465 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4955g00009 9 773 WRKY Transcription Factor Family AT4G12020 33.758 2.30e-107 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4955g00009 - - ahf:112736348 1090.87