Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4955g00007 ATGGCAAGTCAAGGGCTCCTATCCCCCTCCTTTTCCGGTGAATGGACTTACGATGTATTCCTTAGTTTTAGAGGTGAAGATACCCGCACCAATTTTACTGGCCATCTCTACAATGCTCTCAAGCTAAAGGGTATTCTAACTTTCATTGATGATGTGGGTCTCCAAAGAGGGGAAGAAATCACTCCAGCTCTTCTCGAAGCCATCCGACAATCGAGGATTGCCATCATCGTTTTCTCCAAAAATTATGCATCCTCTACTTTCTGCCTTGATGAACTTGTCAACATACTTCACTGCGTCAGAGGAGAAGGTCGGTTGGTCTGGCCGGTTTTCTACGATGTCGATCCATCAGAAGTCCGACACCAGCGTGGGAGTTACGGACAGGCGTTGGCAAAACACGATGATCGATTCCAAGCCAACAAGGAGAAAGTGAGGGAGTGGAGGGAGGCTTTATGTGTGGCAGCTAACCTATCTGGCTGGCATTTCCAACATGGATCTCAACCTGAATATGAATTTATAAATGGGATCATTGAAGAGGTATCCAAAAAGATCGATCGCGTTCCTTTACACATAGCTAATCACCCTGTTGGACTGGAATCTTCTGTTCAAGAAGTGATCTCACTTCTGGAACTTGGGTCTGATAAGGGGGTTAACATGGTAGGGATATGTGGAATCGGTGGAGTAGGTAAAACAACAGTTGCACGGGCTGTTTATAACCTCATCGGTGATCAATTTGAAGGTGTCTGCTTTCTTGCTGATGTTAGAGAGAAGGCTATTGGCAAGCATGGACTTGTGCAACTTCAAGAGACGCTACTTTCTCAAGTACTTGCCGGACGACCTGATTGGTTTGGATTTGGCAGTAGGATCATTATCACGACGAGAGATAAACATTTGCTTAGTGCTCATGGGGTACAAAAATTATATGAGGTGAAGGGGCTAAATTTCAATAAATCCCTTGAATTGCTGAGCTGGAATGCCTTTAAGAATAACAGGGTTGATCCAGATTACATGGACGTTTCTCACCGTGCAGTCTCCTATGCTGCTGGCCTTCCGTTGGCTTTGGAAGTAATAGGGTCTGACCTATTTGGTAGAAGTATAGAAGAATGGAATTCTCAGCTAGACAAGTATGCAAGAATCCCTTGTAAAGAGGTCGATGAAATCCTGAAAGTAAGCTATGATAGTTTGGAAGAGAATGAGAAGGAAACTTTCCTTGATATTGCTTGTTTCTTTAATAAATTAGAACTGACTTACACCAAGGAAATGCTGTATGCACATGGCTTACACGGAGACATTGGAATTAGAGTCTTAATGGACAAATCTCTCATCAAGATGGATAGTTCAAATTGTGTGAGAATGCATGACTTAATTCAGGACATGGGCAGAGAAATTGTTAGACAGGAATCAACATTTGAGCCTGGCAAGCGTACTAGGTTGTGGCTTGATGAGGACATCGTTCATGTTTTGGAAGAAAACACGGGAACTGAGAAAATTGAAGTCATTATGCTTCACTCATGCAAATATATAGAAGTGCAATGGAGTGGAGTGGCATTCGAGAAGATGAAAAACCTGAGAATCCTTATTATCGAAAATGTACACTTCTCCAGGGGCCCCGAATATCTCCCTAATACTTTGAGAGTATTGGACTGGAGAGGATATCCATCATCATCTTTACCATCTGATTTTAAGCCCAGGAAACTTGTCATACTCAGCCTACCTGAATGCTGCCTTCAAATTTTTAAACCATCAAAGGTGTTTCATTCTTTAGGTCTCATGGATTTTGAAGGTTGTAAATTCTTAACACAAGTACCTAACCTATCTGGACTGCCTAACTTGGGAGCATTGTGTCTTGATAATTGTACAAATCTGATTAGTGTTCATGAATCAATCGGGTTTCTTGATAAGCTCAGATTGTTGAGTGCCCAAGGTTGCACTCAGCTTGAAATCTTAGCAACTCGCATCTATTTGACTTCTCTTCAGACTCTGGATCTCAGGGGTTGCTCAACGCTTTGGAAGTTCCCAGAAGTACTGGGACTCATGGAGAATATAAGAGACATTTATTTGGATCAGACTGCCATAAAAGAACTTCCATTTTCAATTGAAAACCTTATTGGATTGAAACGGCTATACTTGAGGCGTTGTCCACAGCTTAGACAGCTGCCAAGCAGCATATTCTCAATCCCCAAACTCGAGGTGGTGCTGGCTTACCGAAGTAGAGGATTTCAATTATTTAGAGGGTATGAAATTCAAGCAAAACAGAGGCCAGAAGTGTCTTTTGCCACGATTCAACTCTATTCTCTACCAGATTCTAGCAATCAAAGCACAAGGGACGCTCAGTTCGATTTTTACCTTAATGGTTACTGTATAAGCAAAAGCGAAACAAATTTCTTTCAAATATTTCCTCTTCTAGAAACTTCGGTTAGTTTTGTTCGGCTTTCCAGCACTAGCATCGGATTTCCTCCTTTTAGGGGCCGCTCTACTATCCTCCCAGTGATTGAGAACCAAAAGACAATATTAACAGCCTTCTATGCAAGCAGGGAATCATCAGTTTCTTTCTGGTTCTGTGAGAATTTCCCAAAGATAGGCATATATGTGATTGGGGGATCAGGCACAGAAATAGACTACTCAATCTTGGACGTTAGGCTGAGAGTGTTTGTCAATGGTTCTGAACAACTTGTTTATTTGGGTAATTACATAGTTTGTGAACGAAAAATGGCAAAACATATGATTTGGTGTGGCTTGCGATGCAAACACAATAGGGTGATTTCAACTCATAAATGGAATCATGTTCATGTTTCGTGGGAGTTGAAATACCTCAGGCCATATGATCCTCGGGTAATTTCGGACGACAATGGAACCCCAACAATCGAAATAGATTGGTCTGGAATTCATGTCTATGAGGAAGAAAACAGCAGCATTGAAAATATGCGGTTCACAGACCCTGATATCTCTCTGTCTCAGGTTGAAACGATGAGGAATGACTATATAATCTGTTTTCAGGACACATCAGATTACTGGGAAAGCGAGTTGCTCACACTGATGAAAGCAGCGAATTCAACTCCTTTACTTAGTTTTGAAGAAGTTCAGCAGAGACTTGGTTTTGAAAACTCGAGGCTGCTGTTTAATGTGGCTGACAACTTGGATCGGTTGTGGAGTGGGACAAGAGTACTCTGTCTTCTACGCGGGGGAGGTGGCGGGATAGAAGTTACACGGGAGAAGATACATATGTCCAAGAAAGAGTCGTTGGATACCACCTATCACAGTGATGATAGTAATGTTCTGAGTGCCGCTGTTGAAATTATCGCTGATGCCACGTCTAAGGAACAGAGGGAGGGAATATCTTCTCAGCAGTCCATCAGCGACCAGAAGGAAACTTGCTATCGTGTGACCCCCTTAAAGTTGCCCCTCCAACTTTTTGGGCGGCCGATTTGGGAGGATATTTAG 3438 0.4244 MASQGLLSPSFSGEWTYDVFLSFRGEDTRTNFTGHLYNALKLKGILTFIDDVGLQRGEEITPALLEAIRQSRIAIIVFSKNYASSTFCLDELVNILHCVRGEGRLVWPVFYDVDPSEVRHQRGSYGQALAKHDDRFQANKEKVREWREALCVAANLSGWHFQHGSQPEYEFINGIIEEVSKKIDRVPLHIANHPVGLESSVQEVISLLELGSDKGVNMVGICGIGGVGKTTVARAVYNLIGDQFEGVCFLADVREKAIGKHGLVQLQETLLSQVLAGRPDWFGFGSRIIITTRDKHLLSAHGVQKLYEVKGLNFNKSLELLSWNAFKNNRVDPDYMDVSHRAVSYAAGLPLALEVIGSDLFGRSIEEWNSQLDKYARIPCKEVDEILKVSYDSLEENEKETFLDIACFFNKLELTYTKEMLYAHGLHGDIGIRVLMDKSLIKMDSSNCVRMHDLIQDMGREIVRQESTFEPGKRTRLWLDEDIVHVLEENTGTEKIEVIMLHSCKYIEVQWSGVAFEKMKNLRILIIENVHFSRGPEYLPNTLRVLDWRGYPSSSLPSDFKPRKLVILSLPECCLQIFKPSKVFHSLGLMDFEGCKFLTQVPNLSGLPNLGALCLDNCTNLISVHESIGFLDKLRLLSAQGCTQLEILATRIYLTSLQTLDLRGCSTLWKFPEVLGLMENIRDIYLDQTAIKELPFSIENLIGLKRLYLRRCPQLRQLPSSIFSIPKLEVVLAYRSRGFQLFRGYEIQAKQRPEVSFATIQLYSLPDSSNQSTRDAQFDFYLNGYCISKSETNFFQIFPLLETSVSFVRLSSTSIGFPPFRGRSTILPVIENQKTILTAFYASRESSVSFWFCENFPKIGIYVIGGSGTEIDYSILDVRLRVFVNGSEQLVYLGNYIVCERKMAKHMIWCGLRCKHNRVISTHKWNHVHVSWELKYLRPYDPRVISDDNGTPTIEIDWSGIHVYEEENSSIENMRFTDPDISLSQVETMRNDYIICFQDTSDYWESELLTLMKAANSTPLLSFEEVQQRLGFENSRLLFNVADNLDRLWSGTRVLCLLRGGGGGIEVTREKIHMSKKESLDTTYHSDDSNVLSAAVEIIADATSKEQREGISSQQSISDQKETCYRVTPLKLPLQLFGRPIWEDI 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4955g00007 1145 SUPERFAMILY L domain-like 502 736 - -
Pral4955g00007 1145 Gene3D Ribonuclease Inhibitor 494 652 IPR032675 -
Pral4955g00007 1145 Gene3D Ribonuclease Inhibitor 653 737 IPR032675 -
Pral4955g00007 1145 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Pral4955g00007 1145 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Pral4955g00007 1145 Gene3D - 13 180 IPR035897 -
Pral4955g00007 1145 SUPERFAMILY "Winged helix" DNA-binding domain 382 488 IPR036390 -
Pral4955g00007 1145 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 280 740 IPR044974 GO:0006952
Pral4955g00007 1145 Pfam NB-ARC domain 271 393 IPR002182 GO:0043531
Pral4955g00007 1145 Gene3D - 181 279 IPR027417 -
Pral4955g00007 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 405 IPR027417 -
Pral4955g00007 1145 SMART till_3 16 156 IPR000157 GO:0007165
Pral4955g00007 1145 Pfam TIR domain 17 183 IPR000157 GO:0007165
Pral4955g00007 1145 PRINTS Disease resistance protein signature 652 668 - -
Pral4955g00007 1145 PRINTS Disease resistance protein signature 218 233 - -
Pral4955g00007 1145 PRINTS Disease resistance protein signature 346 360 - -
Pral4955g00007 1145 Gene3D - 311 395 IPR042197 -
Pral4955g00007 1145 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4955g00007 Pral-Chr4955 106055 112513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4955g00007 9 731 WRKY Transcription Factor Family AT4G12020 32.020 3.90e-90 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4955g00007 - - ahf:112736348 1031.55