Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4939g00029 ATGAATGTTGTTGACGAGTTTGATTACTGGAAGGGACAGCCGTCTTTCAAGAGTTGGGCCAAGCAAACTGAGGAGAGTTACCAGTTGCAACAGGCTCTGGCGCTTCGTCTTTCATCGCAGGCTGCCTGTGCGGATGATCCCAATTTCCTGGACCTGGAATCCAGCTCTTCCTCCAAGTCGGCTGAGGCAGTGTCTCATCGATTCTGGGTCAATGGTTGTTTGCAATACTCAGACAAAATTCCAGATGGATTTTATCTTATCCATGGGATGGATGCATATTCATGGACTATAAGCACTGATCTGCAGAATGTTGGCCTGATTCCGTCATTTGAATCACTGATGTCAGTTGAACCATGTGATGATTTGTCAGTTATAGTGGTTGCAATTGACAAATCAAGAGATCCTGGTTTGAGAGAACTGCTAAATGGCATAGTTAGTCTTTCTAATAGCCGGATTACTAGAAAGGATTTAATCGATCACCTTGCAAATATTGTTTGCAGTAGGTTGGGGGGCCAAACCTGGACCGAAGAAAACTTATCTTCGCGCTGGAAGGAGTGCACTCAAAGTCTAGAAGACATCCTTCATTCTGTCATTCTTCCAATTGGAAGCTTAACTGTTGGCTTATGTGTCCACCGAGCATTGCTCTTTAAGGTATTAGCTGATTCAGTGAACCTCCCATGCCGAATTGTCAAGGGTTGCAAGTATTGTAAAAAGGATGTAGGTGCCTCGTGTTTAGTGCAAATCAGCCCTGACAGGGAGTATTTGATTGATATGGTTGGAAGACCAGGGGCTATGAGCCAGCCCGATTCTTCCCTGAATTCTGCATCTTCATTATTAATTGCTTCACCACTATGTCATCCGAAGTTCAAGCCAGTTGAAACTGCTGAATATTCAAAGACGTTGGCCCAATTGTATTTCATGGACTGTCAAGGCCTGCAACTTGTATTTGACTCCAAATCAGGTGGTGCAGTTGATCATAGTGATGGAATTGATCGAAAGCCTACTGAAGCTTTTAATGCAAACTACGCAGAAGAGTATGCGTCATTCAAAAAGGCAAACCAGTCAGTATTGGATAATCAGAGTCACAAGATTGATCTTGATGACGATGATCTGGAAATTTTATGGAGCGAACTTATTTTGAAAGATAAAATTGGAACAGGTTCATTTGGAACTGTCCTTCGTGCAGATTGGCGTGGTTCTGATGTTGCTGTGAAAATTCTCAAGGTTCAAGGTTTTGATGCAGAACGATATGAAGAATTTAGAAAGGAGGTATCACTCATGAAACGTCTGCGGCATCCAAACATAGTTCTCTTCATGGGTGCAGTTTTTGAACAACCCAACTTGTCAATAGTGACAGAATATTTATCAAGAGGAAGCTTGTTTGAACTTCTGCGCATGCCAGATGCTAGATTAGTTCTCAGTGAGAAGCGTCGGTTGAGTATGGCTTATGATGTGGCAAGCGGAATGAATTATCTTCATCAAATGAGACCTCCTATTGTTCATAGAGATCTTAAGTCTCCAAATCTTTTGGTGGACGATACTTACACGGTCAAGGTATGTGATTTTGGTCTCTCACGTACCAAGGCAAACACATTTCTTTCATCTAAAACAGCCGCTGGGACGCCTGAGTGGATGGCGCCAGAAGTGATTCGTGGTGAACCATCAAATGAAAAATGTGACATATTCAGCTTTGGTGTAATCCTGTGGGAACTAGTGACCCTGCAACAACCTTGGAGAAATTTAAATCCGTCTCAGGTTGTTGCAGCCGTTGGTTTCATGGACAGAAGACTAGAGATGCCGACCTATGTGAATCCCAAAGTGGTTGCCTTGATTCAACTCTGCTGGGCCGTTGAACCCTCGAGCCGCCCCTCTTTCTCCTATATTATGAACTTTCTGCAGCAAATGATTGCCGATACTCAAGGGTGA 1926 0.4335 MNVVDEFDYWKGQPSFKSWAKQTEESYQLQQALALRLSSQAACADDPNFLDLESSSSSKSAEAVSHRFWVNGCLQYSDKIPDGFYLIHGMDAYSWTISTDLQNVGLIPSFESLMSVEPCDDLSVIVVAIDKSRDPGLRELLNGIVSLSNSRITRKDLIDHLANIVCSRLGGQTWTEENLSSRWKECTQSLEDILHSVILPIGSLTVGLCVHRALLFKVLADSVNLPCRIVKGCKYCKKDVGASCLVQISPDREYLIDMVGRPGAMSQPDSSLNSASSLLIASPLCHPKFKPVETAEYSKTLAQLYFMDCQGLQLVFDSKSGGAVDHSDGIDRKPTEAFNANYAEEYASFKKANQSVLDNQSHKIDLDDDDLEILWSELILKDKIGTGSFGTVLRADWRGSDVAVKILKVQGFDAERYEEFRKEVSLMKRLRHPNIVLFMGAVFEQPNLSIVTEYLSRGSLFELLRMPDARLVLSEKRRLSMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDTYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGEPSNEKCDIFSFGVILWELVTLQQPWRNLNPSQVVAAVGFMDRRLEMPTYVNPKVVALIQLCWAVEPSSRPSFSYIMNFLQQMIADTQG 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4939g00029 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Pral4939g00029 641 PRINTS Tyrosine kinase catalytic domain signature 452 465 IPR001245 GO:0004672|GO:0006468
Pral4939g00029 641 PRINTS Tyrosine kinase catalytic domain signature 540 550 IPR001245 GO:0004672|GO:0006468
Pral4939g00029 641 PRINTS Tyrosine kinase catalytic domain signature 559 581 IPR001245 GO:0004672|GO:0006468
Pral4939g00029 641 PRINTS Tyrosine kinase catalytic domain signature 493 511 IPR001245 GO:0004672|GO:0006468
Pral4939g00029 641 PRINTS Tyrosine kinase catalytic domain signature 603 625 IPR001245 GO:0004672|GO:0006468
Pral4939g00029 641 ProSitePatterns Protein kinases ATP-binding region signature. 384 405 IPR017441 GO:0005524
Pral4939g00029 641 Pfam Ethylene-responsive protein kinase Le-CTR1 61 265 - -
Pral4939g00029 641 FunFam Serine/threonine-protein kinase isoform 1 368 456 - -
Pral4939g00029 641 SUPERFAMILY Protein kinase-like (PK-like) 362 632 IPR011009 -
Pral4939g00029 641 Gene3D Transferase(Phosphotransferase) domain 1 457 640 - -
Pral4939g00029 641 FunFam Serine/threonine-protein kinase CTR1 457 641 - -
Pral4939g00029 641 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 62 635 - -
Pral4939g00029 641 SMART serkin_6 378 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4939g00029 641 CDD STKc_MAP3K-like 384 632 - -
Pral4939g00029 641 Pfam Protein tyrosine and serine/threonine kinase 379 632 IPR001245 GO:0004672|GO:0006468
Pral4939g00029 641 ProSiteProfiles Protein kinase domain profile. 378 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4939g00029 641 Gene3D Phosphorylase Kinase; domain 1 371 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4939g00029 Pral-Chr4939 195223 204946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4939g00029 19 636 MAP Kinase Kinase Kinase AT5G03730 57.975 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral4939g00029 PK_Tyr_Ser-Thr 1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4939g00029 K14510 - gmx:100807496 931.013