Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4932g00003 ATGTTCTATTACCGGAGGAACTTCGTTCTTGTACTCACGATCTTCATCGTCCACTCAACAAGAGCACAAAAGTCGGGCGACTGTGATCGCAGTTGTGGAAAACATTCCGTGCTGTATCCATTCGGATTCTCTGAGAAGTGCCACCTCAAATTAAATTGCAGCGACAGCCGCATGAAAATTGGGGAATTCGAGGTGGAGAAAGTAACCCCCAGAAGTATATTCGTCAATCTTCCTGCGAAATGCAACCGCAGTATGAAATCTATTCAGCATCTTTTCAGTAAAAACTTCGCTCCCACACGAAACAATAGCCTTCTGGTGCAAAATTGTTCGTCTCAGCAAGGAGGCTGCTTCATACCCACCGCCGGTCTGATGCACAGTCTATTCAATTTGGAGAATTGCCATAGTCATAACATCGGTTGCTTTTCGCAAAGAAATAATGATTCCGATGTTCTGGCACCAGCGGATGTTAATCAACCTACGTGCAAGTTATTCTCTGCGGTTGCTATTGAGCAAGGCAACGACCCAACGATTTCGCTCCGTCTTCAGGTGCTTGAATTGGGGTGGTGGCTTGAAGGTCTAACCCCCCAATGCTCTGACAATGCATCCCCTACCAAAGTCAATCTTGGCGGCGTGAAGACCGGGTACCGATGCCAATGTCGTGAAGGTTACACCGGAGATGGCTTCAAGAACGGCGTTGGTTGCCGGAAAGTTTCTCAGTGCGGAGCTGCAACACTAATGTCTGGTGGATGTGGAAAGGCAATTAAAATCGGTGTTCTTGCTGGAGGGGTCATTGTTGTAGCTTTCATCCTGCTTGGTGTGTGTCTTCGATGTTACTTTGCTCGGCGCCGTTACATTTGTTTGAGCAAACAAATGACAGTGAAGCGCCTATTACGTGAAGCTGCAGGCAACTCTATTATTCCTTTTTACCCGTACAAAGAAATAGAAAGAGCCACTAATTTTTTCTCAGATGAACAGAGGTTGGGAACAGGGGCTTTTGGCACGGTATATGCAGGAAAACTACACGATAGTGAATGCGTTGCAATTAAAAAGATCAAGTATAGAGACACCAACAGTGTTGACCGAGTTATGAACGAGATCAAACTTCTTTCTTCTGTAAGTCACCCTAATTTAGTTCGCCTCTTGGGCTGCTGCATAGAGGGTGGTGAGCAGATACTTGTTTATGAGTTTATGCCCAATGGAACACTATCCCAACATTTACAAAGAGAGAGGGGAAACGGACTTCCATGGACAATACGACTCACCATTGCCACTGAAACTGCTAATGCTATAGCATATCTTCATTCTGCCATGGATCCCCCAATTTATCACAGGGACATAAAATCCACTAATATACTCTTAGATTACAACTTCAAATCGAAAGTAGCAGATTTTGGGCTTTCTAGGCTTGGTATGACAGAAACATCACATATCTCAACTGCTCCACAAGGGACTCCAGGCTATGTCGACCCTCAATACCACCAAAACTTCCATCTTTCTGATAAAAGTGATGTCTATAGTTTTGGAGTGGTTTTGGTAGAGATAATAACAGCCCTGAAAGTGGTTGATTTTGCTCGACCCCATAGTGAGGTTAATTTGGCTGCACTTGCTGTGGATAAGATCAGAAGGGGCTCTGTGGATGAGATCATAGATCCTTTTCTGGAGCCTCACAGGGATGCCTGGACACTCTACTCTGTTCACAAGGTTGCTGAGCTTGCATTTAGATGCCTTGCTTATCATAGTGACATGAGACCTACCATGTTGGAAGTGGCAGAGGAGCTAGAACATATCAGACGCAGTGGATGGGCAACAATGGAAGAAACTCTATTCACAGCATCATCGGTTGGCTCCTCATGTTCCTCACCTCGCATTGGAAGTGAGAAGTCGATGGATTGTGTTGCTCTTAAGAAAGCAGAACGAGGGAGCAAGAGATCAATGAGTCACAAGAGGATGGATAAAATACAGCATTCTGCGGAAAAAGTGAAGGATAGCTCTCCTGTATCAGTGCATGATCCTTGGTTAAGTGGACAAAGTTCACCCTCAGCAAACAGCTTGTTGGGAAATGTAGTTCAGTGA 2073 0.4501 MFYYRRNFVLVLTIFIVHSTRAQKSGDCDRSCGKHSVLYPFGFSEKCHLKLNCSDSRMKIGEFEVEKVTPRSIFVNLPAKCNRSMKSIQHLFSKNFAPTRNNSLLVQNCSSQQGGCFIPTAGLMHSLFNLENCHSHNIGCFSQRNNDSDVLAPADVNQPTCKLFSAVAIEQGNDPTISLRLQVLELGWWLEGLTPQCSDNASPTKVNLGGVKTGYRCQCREGYTGDGFKNGVGCRKVSQCGAATLMSGGCGKAIKIGVLAGGVIVVAFILLGVCLRCYFARRRYICLSKQMTVKRLLREAAGNSIIPFYPYKEIERATNFFSDEQRLGTGAFGTVYAGKLHDSECVAIKKIKYRDTNSVDRVMNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEFMPNGTLSQHLQRERGNGLPWTIRLTIATETANAIAYLHSAMDPPIYHRDIKSTNILLDYNFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFARPHSEVNLAALAVDKIRRGSVDEIIDPFLEPHRDAWTLYSVHKVAELAFRCLAYHSDMRPTMLEVAEELEHIRRSGWATMEETLFTASSVGSSCSSPRIGSEKSMDCVALKKAERGSKRSMSHKRMDKIQHSAEKVKDSSPVSVHDPWLSGQSSPSANSLLGNVVQ 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4932g00003 690 ProSiteProfiles Protein kinase domain profile. 321 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4932g00003 690 Pfam Protein tyrosine and serine/threonine kinase 324 593 IPR001245 GO:0004672|GO:0006468
Pral4932g00003 690 FunFam Wall-associated receptor kinase-like 20 397 606 - -
Pral4932g00003 690 SMART serkin_6 321 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4932g00003 690 MobiDBLite consensus disorder prediction 637 665 - -
Pral4932g00003 690 MobiDBLite consensus disorder prediction 637 690 - -
Pral4932g00003 690 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 676 IPR044652 GO:0004672
Pral4932g00003 690 FunFam Wall-associated receptor kinase-like 14 288 396 - -
Pral4932g00003 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Pral4932g00003 690 Gene3D Phosphorylase Kinase; domain 1 285 396 - -
Pral4932g00003 690 ProSitePatterns Protein kinases ATP-binding region signature. 327 350 IPR017441 GO:0005524
Pral4932g00003 690 MobiDBLite consensus disorder prediction 669 690 - -
Pral4932g00003 690 Gene3D Transferase(Phosphotransferase) domain 1 397 612 - -
Pral4932g00003 690 SUPERFAMILY Protein kinase-like (PK-like) 303 594 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4932g00003 Pral-Chr4932 22600 28248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4932g00003 1 688 Receptor kinase-like Gene Family AT2G23450 53.201 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4932g00003 PK_Tyr_Ser-Thr 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4932g00003 - - pcin:129311319 1159.05