Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4929g00002 ATGCTTCAACAAAAACCTTTCTTCTTCTTCTTCTTATTGGGCTTCATAATCTGGTCATGGGGGACTCTGGACGGCGTCGTTTCAGACCCGCAGACCAATTACGTGAAGATAGGATGCAGCCAATACAACGTGACGGACACGCGCATCTTCCATGAAAACCTGAAGACGACATTCAGAGAGCTGAAAGCACAGGTCAAAAACCAAAGCAAACACTTCGCGACGTCGCAGGCGGTGAAGGGGAACAACCCAGCTTACAGTCTTTTTCAGTGCAGAAACTATCTCTCCATCTCCGATTGCCTCGCTTGCTTCAGATTCGCCGCCCGGCATATTCGCAACTGCTCCTACAGCGCCACCGGTGCCCGTATCATCTATGAAGGATGCTTCCTCAGGTACGAGAGCAGTGGCTTCTTTGACCAAAACACAGATGCTGGCAACAACATTGTGTGTGGGAATAAAGCAACAAACTCCACTTCACTTGCTTCAACAGTAGAACAAGTTCTCACAAATCTGGAAATAGCAACACCAAGAATACCTGGTTTCTATGCAGCCACTAAAACACAAGTTCCTAATAGTAACACTTCGATTTATGCCATTGCTCAATGTCTTGAGACTCTCACTCAAAGTGGCTGCCAAGATTGCTTGAAGACTGGCTTAAAAAATTTCCAGATTTGTCTTCCCAACTCAAATGCTAAGACTTATGATGCTGGTTGTTTCATGAGATACTCCACGACTGCTTTCTTTGCTGATAATCAAACCACTAATATCAAGCACTTCCTGAAACAAGGAGGAGGTTCAACCAAGAAGAAGGCTATTATTGGTGGAGTAGTTGGAGGTGCATCTATTATTTTGATTCTTCTTGCATTATTTGCTTTGCACAGACGATCACAGTTATCCAAGAGGAATCCTAGGGGTGACATTTTGGGAGCAACTGAGTTGAAAGGCCCCGTTAACTACAGGTATAAAGATCTAAAGGCAGCCACAAAAAGCTTCAGCAAAGAAAATAAATTAGGAGAAGGAGGTTTTGGTGATGTGTACAAGGGCACTTTGAAAAATGGAAAAGTTGTTGCTGTCAAGAAATTGGCCTTAGGTCAGTCCAAAGAGATGGAGAAAAATTTTGAAAGTGAAGTGAAGCTGATAAGCAATGTTCATCATCGGAATCTTGTTCGACTTCTGGGATGTTGTAGCAAAGGACAAGAAAGGCTCCTTGTTTATGAGTACATGAAAAACAACAATGTTGGCCAATACTTATTTGGTAAAAATAAAGGTTCTCTCAGTTGGAAGCTACGTTCTGGTATAATTTTGGGCATTGCAAGGGGTTTGGCCTATCTACATGAGGAGTTCCACATTTGTATTATACACAGAGATATAAAAACTAGCAACATCCTCTTAGATGATGATTTTCAACCTAAAATTGCTGATTTTGGACTAGCAAGGCTTTTGCCAAGAGACCAATCTCATCTTAATACAAGATTTGCAGGAACAATGGGATATACAGCACCTGAATATGCAATGCATGGACAATTATCAGAGAAAGTTGATACTTACAGTTATGGAGTTGTAGTCTTAGAACTCATAAGCGGGCAGAAGAGTGGTGAATTGAAGGTTAATAATGAAAGTGAATTACTCCTTCAAAAGGCTTGGAAGCTATATGAGAGAGGAATGCACATAGAGTTTGTGGACAAAACGTTAGACCCAAGTGAGTATGATGCAGAAGAAATAAAGAAAATAATAGAAATTGGATTACTCTGCACTCAAGCATCTCCTGCTGCAAGGCCAACAATGTCTGAAATTGTTGTTATGCTCAAAAGCAAAGGCTTAATGGAGCACAAGAAACCCACTATGCCTGTCTATGTTGATCCTAATTGGAGGCCTAGAAGAGACACATCCACGTCTAATGGTTCAGCTTCATCAAATGCTACCGTGTCCCAGTCCATTCTATCAGGAAGGTAA 1950 0.4164 MLQQKPFFFFFLLGFIIWSWGTLDGVVSDPQTNYVKIGCSQYNVTDTRIFHENLKTTFRELKAQVKNQSKHFATSQAVKGNNPAYSLFQCRNYLSISDCLACFRFAARHIRNCSYSATGARIIYEGCFLRYESSGFFDQNTDAGNNIVCGNKATNSTSLASTVEQVLTNLEIATPRIPGFYAATKTQVPNSNTSIYAIAQCLETLTQSGCQDCLKTGLKNFQICLPNSNAKTYDAGCFMRYSTTAFFADNQTTNIKHFLKQGGGSTKKKAIIGGVVGGASIILILLALFALHRRSQLSKRNPRGDILGATELKGPVNYRYKDLKAATKSFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKEMEKNFESEVKLISNVHHRNLVRLLGCCSKGQERLLVYEYMKNNNVGQYLFGKNKGSLSWKLRSGIILGIARGLAYLHEEFHICIIHRDIKTSNILLDDDFQPKIADFGLARLLPRDQSHLNTRFAGTMGYTAPEYAMHGQLSEKVDTYSYGVVVLELISGQKSGELKVNNESELLLQKAWKLYERGMHIEFVDKTLDPSEYDAEEIKKIIEIGLLCTQASPAARPTMSEIVVMLKSKGLMEHKKPTMPVYVDPNWRPRRDTSTSNGSASSNATVSQSILSGR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4929g00002 649 FunFam Cysteine-rich receptor-like protein kinase 2 144 246 - -
Pral4929g00002 649 Gene3D - 143 246 IPR038408 -
Pral4929g00002 649 Gene3D - 31 136 IPR038408 -
Pral4929g00002 649 ProSiteProfiles Protein kinase domain profile. 330 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4929g00002 649 FunFam Cysteine-rich receptor-like protein kinase 2 407 609 - -
Pral4929g00002 649 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 86 631 - -
Pral4929g00002 649 MobiDBLite consensus disorder prediction 624 649 - -
Pral4929g00002 649 Gene3D Phosphorylase Kinase; domain 1 296 406 - -
Pral4929g00002 649 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Pral4929g00002 649 FunFam Cysteine-rich receptor-like protein kinase 2 296 406 - -
Pral4929g00002 649 Coils Coil 51 71 - -
Pral4929g00002 649 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Pral4929g00002 649 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Pral4929g00002 649 Pfam Salt stress response/antifungal 152 243 IPR002902 -
Pral4929g00002 649 Pfam Salt stress response/antifungal 39 133 IPR002902 -
Pral4929g00002 649 SMART serkin_6 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4929g00002 649 Gene3D Transferase(Phosphotransferase) domain 1 407 614 - -
Pral4929g00002 649 Pfam Protein kinase domain 330 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4929g00002 649 SUPERFAMILY Protein kinase-like (PK-like) 311 601 IPR011009 -
Pral4929g00002 649 CDD STKc_IRAK 336 602 - -
Pral4929g00002 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Pral4929g00002 649 MobiDBLite consensus disorder prediction 616 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4929g00002 Pral-Chr4929 48233 53925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4929g00002 6 649 Receptor kinase-like Gene Family AT1G70520 36.544 1.78e-130 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4929g00002 Pkinase 9.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4929g00002 - - gmx:100813585 849.351