Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4929g00001 ATGCTTCAACATTCTTATCTCCTTACCTTGTTCATTTTCACATTCTGGTCATGCTGCGCTATTGACGCCGTCGTTTCAGACCCACAGACTCATCTTGTTACCATCGGCTGCACCCCATTCGACCGCTTCCTCGTTTCCGACTTGTCTGTCTTCAATGACAACCTAAACGCAACGTTTCGAGACATCAGAGAACAGGTTAGAGATCAAAACAAGCATTTCGTTCCGGTTCAGGAAAGCGGTGGCGGAAGCCCTGTGTCCACTCTTTTTCAGTGCAGAAACTACCTTTCTATCGCCGACTGTGTCGCGTGCTTTGATGTAGCTGCCGCCAAAGTCCGGAGCTGCCGTGCCGGAGCCCCTGGTGGCCATGCCGTTTACGACGGCTGCTTCCTCAGGTATGATGCGAGTCCTTTCTTTGACCGGGCGACGGATACTTTCAATGCTGCCTTATGTGGGAATAAAACTACAGGAGAAGCCACTGCCTTTAACTCAGCTGTGCAAAAACTGCTGATGAATCTCCAAAGAGAAACACCAACAATCCCTGGCTTTCTGACAGCCACGAAGACACAAGTACTTAATAATAATGGTCCAACTATATATGCCTTTGTGCAGTGCACAGAAACTATCACACAAAGTGGATGCCTCAGTTGCTTAGATGTTGCATACAGAAATATGCAGACTTGTCTTCCTACTTCAGATGGTCGAGCTTTTGATCAGGGCTGTTTCATGAGATACTCCACAACCTCATTCTTTCCTGATAATTACCAGATCGTTGACGTCACTCCCATGGATAAACAAGGTTCGAGCATTAAGGGGGCTATCATTGGTGGAGTTGTTGGAGGAGTATTGCTTGTTTTGGTTGCCCTTGCACTTTTTGTTTGGATTAAACCACGTAAAAGCCCTAAAAGGGTTCCGGCTAGAGGTAAAAAAAAAAAAGTTCAAATTGAAGGTGCAATTCATTACAGTTACATGGATTTGAAGTACGCAACTAGAAATTTTAGTGTAGAAAATAAACTTGGAGAAGGAGGATTTGGTGCAGTATATAAGGGAACTCTGAAGAATGGGAAAGTAGTTGCAGTCAAGAAGTTGACTTTACGTCGTTCCAATAAAGTGGAGGAAGAATTTGAGAGTGAAGTGAAGCTTATAAACAATGTTCATCATCGAAATCTTGTTCGACTTCTGGGATATTGCAGTAAGGGTGATGAGAGAATTCTTGTTTATGAATACATGAAAAATACCAGTCTCGACAAATTCTTATTTGGTAAAATGAAAGGTTCTCTTGGTTGGAAGCAACGATATATTATAATTTTAGGCACTGCAAGGGGTTTGGCCTATCTACACGAAGAATTTCACAACCGTATCATACATAGAGATATAAAATCCAATAACATCCTCTTAGATGATGATCTTCAACCTAAAATTGCTGACTTTGGGTTGGCAAGACTTTTACCTGAGGACAAATCTCATCTTAGCACGAAATTTGCAGGAACATTAGGATATGCAGCACCGGAGTATGCAATAAATGGACAATTATCTGAGAAGGTTGATATCTACAGCTATGGAGTTGTAGTTCTAGAAATTCTTAGTGGTCAAAAAAGTGAAGAATTGAATGTTAATGGTGAGGCCGAAGGTGAATTCCTCCTTCAAAAGGCATGGAAACTATACGAAAGAGGCATGCATTTAGAGTTGGTGGACAACACTTTAGACTCTAACGACTATGATGCGGAAGAAGTAAAGAAAATAATTGAGATTGGATTGCTTTGTACCCAAGCATCAGCTACAATACGGCCGACAATGTCCGAAGTGGTTGCCTTGCTCCAAAACAAATATTTGTTTGAAAATATGAGACCAACTATGCCTTTCTTGGTTGAAACTAAATAA 1878 0.4169 MLQHSYLLTLFIFTFWSCCAIDAVVSDPQTHLVTIGCTPFDRFLVSDLSVFNDNLNATFRDIREQVRDQNKHFVPVQESGGGSPVSTLFQCRNYLSIADCVACFDVAAAKVRSCRAGAPGGHAVYDGCFLRYDASPFFDRATDTFNAALCGNKTTGEATAFNSAVQKLLMNLQRETPTIPGFLTATKTQVLNNNGPTIYAFVQCTETITQSGCLSCLDVAYRNMQTCLPTSDGRAFDQGCFMRYSTTSFFPDNYQIVDVTPMDKQGSSIKGAIIGGVVGGVLLVLVALALFVWIKPRKSPKRVPARGKKKKVQIEGAIHYSYMDLKYATRNFSVENKLGEGGFGAVYKGTLKNGKVVAVKKLTLRRSNKVEEEFESEVKLINNVHHRNLVRLLGYCSKGDERILVYEYMKNTSLDKFLFGKMKGSLGWKQRYIIILGTARGLAYLHEEFHNRIIHRDIKSNNILLDDDLQPKIADFGLARLLPEDKSHLSTKFAGTLGYAAPEYAINGQLSEKVDIYSYGVVVLEILSGQKSEELNVNGEAEGEFLLQKAWKLYERGMHLELVDNTLDSNDYDAEEVKKIIEIGLLCTQASATIRPTMSEVVALLQNKYLFENMRPTMPFLVETK 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4929g00001 625 Gene3D Transferase(Phosphotransferase) domain 1 409 615 - -
Pral4929g00001 625 ProSiteProfiles Gnk2-homologous domain profile. 143 249 IPR002902 -
Pral4929g00001 625 FunFam Cysteine-rich receptor-like protein kinase 2 145 249 - -
Pral4929g00001 625 FunFam Cysteine-rich receptor-like protein kinase 2 409 613 - -
Pral4929g00001 625 SMART serkin_6 332 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4929g00001 625 Gene3D Phosphorylase Kinase; domain 1 303 408 - -
Pral4929g00001 625 Gene3D - 142 249 IPR038408 -
Pral4929g00001 625 Gene3D - 40 137 IPR038408 -
Pral4929g00001 625 Pfam Protein kinase domain 333 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4929g00001 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Pral4929g00001 625 ProSitePatterns Protein kinases ATP-binding region signature. 338 361 IPR017441 GO:0005524
Pral4929g00001 625 Pfam Salt stress response/antifungal 48 133 IPR002902 -
Pral4929g00001 625 Pfam Salt stress response/antifungal 150 246 IPR002902 -
Pral4929g00001 625 FunFam Cysteine-rich receptor-like protein kinase 2 297 408 - -
Pral4929g00001 625 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Pral4929g00001 625 SUPERFAMILY Protein kinase-like (PK-like) 317 618 IPR011009 -
Pral4929g00001 625 CDD STKc_IRAK 338 607 - -
Pral4929g00001 625 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 619 - -
Pral4929g00001 625 ProSiteProfiles Protein kinase domain profile. 332 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4929g00001 Pral-Chr4929 29684 34802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4929g00001 6 623 Receptor kinase-like Gene Family AT1G70520 36.190 3.79e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4929g00001 Pkinase 2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4929g00001 - - pcin:129300003 761.911