Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4923g00003 ATGGATAAGCAGAGAACTGACGCTTACCTTGCAGTTCAAGCTACATGTGTGGTTTTCTTGGCAATTTGTGTAGTAGCTTCTGGAGAGCCAGAAACAGAGGCCCTTCTCAGGTGGAAAGAAAGTCTTCCAGATCAACCAATTCTGGAGTCATGGGTCTCTCCAGCGCAAAACTCAAGTGCAGCTCAAAGCCCATGTTCATGGCGTGGAATAACATGTGATAATTCCTCAGGAAGTGTGATTGCAGTAAACTTGGCTTACACTGGTCTTGAAGGTACCCTCCAGAACTTGAACTTCTCTGCATTTCCAAATCTTCTCCGCCTTGATCTTAAAACAAACAACCTCACCGGTAGTATACCAGAAAACATTGGAGTGCTTTCTAGATTGCAATATCTTGACCTCTCAACAAATCACCTCAATGGCACTTTACCTCTTTCTCTTGCTAATTTGACTCAAGTTTACGAGTTTGATGTTTCTCGAAACAACATTACTGGGATATTAGACCCTCGTCTCTTTCCTGATGGTTCTGATCAGCCCAAGACTGGACTGATAGGGATCAGAAATCTTCTCTTTCAGGACACCCTGCTTGGTGGTAGAATTCCAGATGAAATAGGGAATATAAAAAATTTAACTGTGCTAGCTTTAGATGGGAATAGCTTTTATGGACCTATTCCCCCATCTCTAGGGAACTGTACACATTTGAGTGTTCTTAGGATGTCTGGAAACCAGCTCTCAGGCGTGATTCCTCCTGGTTTTGGTAGATTGACTAATCTATCTCAGGTTTTCCTCCACATAAATAATTTACAAGGTCCCGTACCACAAGAATTAGGAAACTTCTCTTCTTTAACTGTCCTACATCTTGCTGAAAACAACTTCACTGGAGAGTTACCACCGCAAGTTTGCAAAGGTGGCAAGCTTGCCAATTTCAGTGCTGCCCACAATAGTTTCACCGGCCCAATTCCAATAAGCCTGAGAGATTGCCCATCCTTGTACAGGGTTCGGATGGAATATAACCAACTCAGGGGTTATGCGGATCAAGATTTTGGAGTGTATCCTAATCTTACTTACATGGACTTCAGCTACAATAATGTCCAAGGTGAGCTCTCTTCAAATTGGGGAAGCTGCAAAAACTTGCAATATCTTAGCATGTCTGGAAATTCAATAGGTGGTGCCATACGTGATGATATTTTTCAGTTGAACCAACTGGTAGAGCTACATCTGTCTTCCAATCAAATATCAGGAGAGATTCCCCAACAAATAGGGAATTCTTCTAGCCTTTCCACTCTATCTTTGGGTAGCAACAAACTTTCAGGATTGATACCAGCAAGCATTGGGAAATTGTCCAATTTGCAAACAATAGACTTGTCAACAAACATGCTAAGAGGACAAATCCCTTATCAGATAGGGGATTGCTCAAACTTGTTGAGTTTAAATTTCAGCAACAATGGCTTGAATGGAACAATCCCACACCAAATTGGAAATCTGGCAGCCTTACAAGATTTGTTGGATTTCAGTTACAATTCACTTTCTGGCCAAATTCCAGCTGATCTTAGCAAGCTGAAAAATTTGATCAGCTTGAATATCTCTCACAACAATCTATCTGGTTCCATCCCTGACTCTCTTGGTGACATGTTGAGTTTGTCAAGCATCAATCTCTCTTACAACAACTTGGAGGGTCCTGTACCCAACAGTGGCATATTTAATTCTTCCTATCCAGTGGATTTACGAAACAACAAAGAGTTATGTGGGAATATACAAGACCTGCAACCTTGCAATGTCTCATACACAAAACCTGGAGGTGGAAGCAACAAAAAGAAAGTTATAGTAGCCATTGTTGCTTCTTTGGGAGGTGCACTGCTTGTTTCATCATTGTTGGTTTGCATTTTTGTCTTTTGTTGTAAGACAACATATATGAAACAGAATTCTGCACGGGAGAGAAAAAGTCCATTTTCAATATGGTATTTCAATGGCAGAATTGTTTATGAAGACATAATTGAAGCCACTAAGAACTTTGATGACACCTACTGCATTGGAGAGGGAACATTAGGGAAAGTTTACAGAGTGGCCATGCCAGGAAGTCAAGTAGTTGCTATAAAAAAGTTAAGATGTGAGGCAGATAGCTTAGACATTGAAAGTATAAAATCCTTTAAAAGTGAGATAGAAGCCATGACTGAAACACGTCACAGAAACATTGTGAAGTTGTACGGGTTTTGTTCAGACCCCTTACACACATTTTTAATTTATGAGTACATGGAAAGAGGGAGCTTAAATGATATGCTGAGAAATGAAGAAAAAGCTACTGAGCTAGATTGGCCAAGGAGAGTTGGGATTGTTAAGGGAGTAGCACAAGCTTTATCTTACATGCATCATGATTGCAACCCACCAATAATCCACAGAGACATATCAAGCAAAAATGTATTATTGTCCAAAAATCTGGAAGCTCATGTCTCAGACTTTGGCACAGCAAGGTTCCTGAAGCCAGATTCACATATTTGGACTTCCTTTGCAGGCACATATGGCTACGCAGCTCCAGAGCTTGCATACACAAAGGCAGTGACTGAAAAATGTGACATGTATAGCTTCGGTGTTTTGGCTTTTGAAATTCTCACAGGAAATCATCCAGGAGATCTAATTTCTCATATACAAACATATGGTGTTCAAAACATCAACTTCAAAGAGATTTTAGACCCACGTCTTTCACCTCCTACAAATCAAGAAAAATTGAAGGAATTGGCTTTGATTAGTAATCTGGCTATTTCTTGTTTACAGTCAAACCCTCAATCACGACCAACTATGCGAAGCATAGCTCACATGATTGACATGGAGACAGCTCGTGATTCATGA 2841 0.4048 MDKQRTDAYLAVQATCVVFLAICVVASGEPETEALLRWKESLPDQPILESWVSPAQNSSAAQSPCSWRGITCDNSSGSVIAVNLAYTGLEGTLQNLNFSAFPNLLRLDLKTNNLTGSIPENIGVLSRLQYLDLSTNHLNGTLPLSLANLTQVYEFDVSRNNITGILDPRLFPDGSDQPKTGLIGIRNLLFQDTLLGGRIPDEIGNIKNLTVLALDGNSFYGPIPPSLGNCTHLSVLRMSGNQLSGVIPPGFGRLTNLSQVFLHINNLQGPVPQELGNFSSLTVLHLAENNFTGELPPQVCKGGKLANFSAAHNSFTGPIPISLRDCPSLYRVRMEYNQLRGYADQDFGVYPNLTYMDFSYNNVQGELSSNWGSCKNLQYLSMSGNSIGGAIRDDIFQLNQLVELHLSSNQISGEIPQQIGNSSSLSTLSLGSNKLSGLIPASIGKLSNLQTIDLSTNMLRGQIPYQIGDCSNLLSLNFSNNGLNGTIPHQIGNLAALQDLLDFSYNSLSGQIPADLSKLKNLISLNISHNNLSGSIPDSLGDMLSLSSINLSYNNLEGPVPNSGIFNSSYPVDLRNNKELCGNIQDLQPCNVSYTKPGGGSNKKKVIVAIVASLGGALLVSSLLVCIFVFCCKTTYMKQNSARERKSPFSIWYFNGRIVYEDIIEATKNFDDTYCIGEGTLGKVYRVAMPGSQVVAIKKLRCEADSLDIESIKSFKSEIEAMTETRHRNIVKLYGFCSDPLHTFLIYEYMERGSLNDMLRNEEKATELDWPRRVGIVKGVAQALSYMHHDCNPPIIHRDISSKNVLLSKNLEAHVSDFGTARFLKPDSHIWTSFAGTYGYAAPELAYTKAVTEKCDMYSFGVLAFEILTGNHPGDLISHIQTYGVQNINFKEILDPRLSPPTNQEKLKELALISNLAISCLQSNPQSRPTMRSIAHMIDMETARDS 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4923g00003 946 SMART serkin_6 670 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4923g00003 946 Gene3D Ribonuclease Inhibitor 114 175 IPR032675 -
Pral4923g00003 946 PRINTS Leucine-rich repeat signature 128 141 - -
Pral4923g00003 946 PRINTS Leucine-rich repeat signature 446 459 - -
Pral4923g00003 946 PANTHER LEUCINE RICH REPEAT KINASE 2 191 942 - -
Pral4923g00003 946 SUPERFAMILY Protein kinase-like (PK-like) 645 938 IPR011009 -
Pral4923g00003 946 ProSiteProfiles Protein kinase domain profile. 670 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4923g00003 946 SMART LRR_typ_2 446 470 IPR003591 -
Pral4923g00003 946 SMART LRR_typ_2 519 543 IPR003591 -
Pral4923g00003 946 SMART LRR_typ_2 149 173 IPR003591 -
Pral4923g00003 946 SMART LRR_typ_2 398 422 IPR003591 -
Pral4923g00003 946 SMART LRR_typ_2 278 302 IPR003591 -
Pral4923g00003 946 SMART LRR_typ_2 125 148 IPR003591 -
Pral4923g00003 946 Pfam Protein kinase domain 675 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4923g00003 946 SUPERFAMILY L domain-like 61 366 - -
Pral4923g00003 946 FunFam Nuclear pore complex protein NUP107 28 171 - -
Pral4923g00003 946 Gene3D Ribonuclease Inhibitor 23 113 IPR032675 -
Pral4923g00003 946 Gene3D Ribonuclease Inhibitor 275 596 IPR032675 -
Pral4923g00003 946 FunFam Leucine-rich repeat receptor protein kinase MSP1 633 749 - -
Pral4923g00003 946 SUPERFAMILY RNI-like 271 559 - -
Pral4923g00003 946 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Pral4923g00003 946 Gene3D Ribonuclease Inhibitor 179 274 IPR032675 -
Pral4923g00003 946 FunFam MDIS1-interacting receptor like kinase 2 750 944 - -
Pral4923g00003 946 ProSitePatterns Tyrosine protein kinases specific active-site signature. 795 807 IPR008266 GO:0004672|GO:0006468
Pral4923g00003 946 Pfam Leucine rich repeat 400 459 IPR001611 GO:0005515
Pral4923g00003 946 Pfam Leucine Rich Repeat 521 540 IPR001611 GO:0005515
Pral4923g00003 946 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 180 270 - -
Pral4923g00003 946 Gene3D Transferase(Phosphotransferase) domain 1 750 945 - -
Pral4923g00003 946 Gene3D Phosphorylase Kinase; domain 1 632 749 - -
Pral4923g00003 946 FunFam Leucine-rich repeat receptor-like protein kinase TDR 275 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4923g00003 Pral-Chr4923 138352 141812 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4923g00003 7 843 Receptor kinase-like Gene Family AT4G08850 40.491 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4923g00003 Pkinase 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4923g00003 - - aprc:113866080 1363.98