Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4923g00001 ATGGCTCATAATACAATTTCTCTCTTACTTGCAAGCCACATTGCTTGCTTGGTTTTTTGGTCACTATATCATTGCCAGCTCACTTCAGGACTTACAGAAACTGAAGCTCTTCTCAGATGGAAGCAAAGTCTCCCATATCAGCCAATTCTGGATTCATGGGTCTCTCAGCCTCAAGCCAATTCCACTTCAGCCCAAACCCCTTATTCATGGCGTGGAATAAAGTGTGATTCTTCAGGAAGTGTGGTTGAACTCAACTTGAATAACACTGGTCTCAAAGGTACCCTTAAAAACTTGAATTTCTCAGCGTTCCCAAATCTTGTTCTTCTTAATCTCAAATTTAATCAGCTCACTGGTCCCATACCAGAAACAATTGGGTATCTCTCAAAACTACAGTTCCTTGACCTCAATCGTAATCATCTCAATGGCACTATGCCTCTTTCTCTTTCTAATCTTACTCAACTTTATGAGCTTGACCTTTCACAGAATGATATAACTGGGATATTAGACCCTCGTCTATTCCCTGTTGGATCTGATGAACCCAAAACAGGCTTGATTGGTATAAAGTATCTTGTGCTTCAAGGCATGCTCCTTGGAGGCAGAATTCCAAATGAAATAGGGAATTTGAGACAGTTGACTGTTCTAACTCTATATCGAAATAGCTTTTATGGACCTATACCTCAGTCTCTAGGGAATTGTACACATCTAAACATTCTGTCTTTGGCTGTAAACGATCTCTCAGGTGCAATTCCCCCTACTCTTGGTACACTACCCAATCTAACAGAAGTTTATTTGTTTATGAACAATTTATCCGGTCCTTTACCACAAGGATTTGAAAATCGTTCTTTTACTATGCTTGTTATCTCTGATAACAATTTCACTGGCCACTTACCACCACAAGTATGCAAAGACGGGAAGTTACTTGAGTTCACTGTAGCTTACAATAGTTTCACTGGTCCAATCCCCATGAGCCTCAGAAACTGCACATCTTTGGTTAGAGTTCGTCTTGAACATAACCAATTGACAGGATATGTAGATAAGGATTTGGGAGTTTATCCTAATCTTACCTACATGGACCTCAGCTACAATAGGCTGCAAGGTGAGCTTTCTGCAAATTGGGGTGCCTGCAAGAGTTTGCAAGCTCTTATCATGGCTGGAAATTCAATAGGGGGGATTTTACCTAGTGAGATCTTTCAGTTGAAACAGCTACGAAAGCTTCATTTGTCTTCAAACCGAATATCTGGCGAGATTCCTGCTCAAGTTGGAATTAGCTCTAACTTGTATCATCTGCATCTGGGTAGCAACAATCTTTCAGGAGTGATACCAGAAGGCATTGGGAAGCTTTCTAGTTTGGAGTCTTTAGATATGTCAATGAATAGATTAAGGGAACCTATCCCTTATCAGATAGGTGATTGCTACAAGTTGCTGAATTTAAACTTTAGCAACAATTACTTTAGTGGCAAAGTCCCATACCAAATAGGAAATCTTTTGGCTTTACAAGATTTTTTGGATCTGAGTCACAATTCACTTTCTGGAGAAATCCCTGTTGATCTTAGTAAACTCAACAAGTTGATAAGCTTGAACATGTCTCACAATAATTTCTCAGGTCCTGTCCCTAACTTCTTAACAAGAATGTTAAGCTTGTCAAGCATCAACCTCTCCCATAACAATTTGGAAGGTCCTGTACCAGACAGTGGAATTTTTAATTCTTCTAAGTCAGTGGATCTAAGTAACAATAAAGATTTATGTGGGAGGATCCAAGGCTTAAAACCTTGCAATATCTCATCTATAAAGCCACATGGTGGAACTAACAAAGGAAAAATGGTTATAGCTGTCACTTCTTCTTTGGCTGCGGCATTGATTTTGTTGGGAGTGATTGGGATTTTTATTATTCTCCATAAGAGAAACTCAAGAGCCGTAGAACATATCACAAGGGCCTGCAAAGAAAATCTATTCTCCATATGGCACTTTGATGGCAAAATTTTGTATGAAGACATAATTGAAGCAACTGGGAACTTTGCTGAAAAATACTGCATTGGGGAGGGAGCTCTTGGAAAAGTTTACAAGCTGACATTACCAGGGGAGGATAAAGTATTTGCTATAAAAAAGTTGGTGTGTGAAGCTGATAACCTTGATATTGAAAGCATAAAAGCTTTTAAGAGTGAGATCAAAGCCCTAACAGAAACACGACATCGTAACATTGTGAAATTGTACGGGTTTTGCTCACAAAAGCTGCACACATTTCTGATTTATGAGTACATGGAAAGAGGGAGCTTAGCTGATATACTTAGAAATGATAAAGAAGCATCAGAGTTGGACTGGTCAAGGAGGTTTAATATTATCAAGGGCGTAGCACAAGCTTTATCTTACATGCATCATGATTGTAATCAGCCAATTGTTCATAGAGACATATCTAGCAAAAACATTTTACTGTCTTCAAATCTTGAAGCCCATGTCTCAGATTTTGGCACAACAAGATTCTTGAAGCCTGATTCATCAATTTGGACAACATTTGCTGGCACATATGGCTATGCTGCTCCGGAGCTTGCATACACAATGGCAGTGACAGAAAAAATTGATGTCTATAGCTTTGGTGTTTTGGCTATTGAAGTGCTTATGGGAGAGCATCCTGGTGAGTTAATATCCTACAACAGAACAAGTGGGATGAATCAGATCAACTTCAAAGAGATTCTGGACCCTCGTTTATCATCAACAAATCAGCAAAACTTGAAGAAATTGGCTTTGATTTGGCACCTGGCTCTTCAATGCTTACAAGCAAACCCTCATGCTCGGCCAGCCATGCGAAATGTTGCACAATTGATGGAGATGGAGAGTGCTCATGAGATATGA 2847 0.3945 MAHNTISLLLASHIACLVFWSLYHCQLTSGLTETEALLRWKQSLPYQPILDSWVSQPQANSTSAQTPYSWRGIKCDSSGSVVELNLNNTGLKGTLKNLNFSAFPNLVLLNLKFNQLTGPIPETIGYLSKLQFLDLNRNHLNGTMPLSLSNLTQLYELDLSQNDITGILDPRLFPVGSDEPKTGLIGIKYLVLQGMLLGGRIPNEIGNLRQLTVLTLYRNSFYGPIPQSLGNCTHLNILSLAVNDLSGAIPPTLGTLPNLTEVYLFMNNLSGPLPQGFENRSFTMLVISDNNFTGHLPPQVCKDGKLLEFTVAYNSFTGPIPMSLRNCTSLVRVRLEHNQLTGYVDKDLGVYPNLTYMDLSYNRLQGELSANWGACKSLQALIMAGNSIGGILPSEIFQLKQLRKLHLSSNRISGEIPAQVGISSNLYHLHLGSNNLSGVIPEGIGKLSSLESLDMSMNRLREPIPYQIGDCYKLLNLNFSNNYFSGKVPYQIGNLLALQDFLDLSHNSLSGEIPVDLSKLNKLISLNMSHNNFSGPVPNFLTRMLSLSSINLSHNNLEGPVPDSGIFNSSKSVDLSNNKDLCGRIQGLKPCNISSIKPHGGTNKGKMVIAVTSSLAAALILLGVIGIFIILHKRNSRAVEHITRACKENLFSIWHFDGKILYEDIIEATGNFAEKYCIGEGALGKVYKLTLPGEDKVFAIKKLVCEADNLDIESIKAFKSEIKALTETRHRNIVKLYGFCSQKLHTFLIYEYMERGSLADILRNDKEASELDWSRRFNIIKGVAQALSYMHHDCNQPIVHRDISSKNILLSSNLEAHVSDFGTTRFLKPDSSIWTTFAGTYGYAAPELAYTMAVTEKIDVYSFGVLAIEVLMGEHPGELISYNRTSGMNQINFKEILDPRLSSTNQQNLKKLALIWHLALQCLQANPHARPAMRNVAQLMEMESAHEI 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4923g00001 948 Pfam Protein kinase domain 675 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4923g00001 948 Gene3D Transferase(Phosphotransferase) domain 1 753 947 - -
Pral4923g00001 948 FunFam Leucine-rich repeat receptor protein kinase EMS1 183 276 - -
Pral4923g00001 948 FunFam Leucine-rich repeat receptor protein kinase MSP1 634 752 - -
Pral4923g00001 948 Gene3D Ribonuclease Inhibitor 281 594 IPR032675 -
Pral4923g00001 948 Gene3D Ribonuclease Inhibitor 182 280 IPR032675 -
Pral4923g00001 948 SUPERFAMILY Protein kinase-like (PK-like) 656 941 IPR011009 -
Pral4923g00001 948 PANTHER LEUCINE RICH REPEAT KINASE 2 187 943 - -
Pral4923g00001 948 SUPERFAMILY L domain-like 62 389 - -
Pral4923g00001 948 ProSitePatterns Tyrosine protein kinases specific active-site signature. 798 810 IPR008266 GO:0004672|GO:0006468
Pral4923g00001 948 Gene3D Phosphorylase Kinase; domain 1 633 752 - -
Pral4923g00001 948 Gene3D Ribonuclease Inhibitor 31 177 IPR032675 -
Pral4923g00001 948 SMART LRR_typ_2 256 279 IPR003591 -
Pral4923g00001 948 SMART LRR_typ_2 399 423 IPR003591 -
Pral4923g00001 948 SMART LRR_typ_2 544 569 IPR003591 -
Pral4923g00001 948 SMART LRR_typ_2 127 150 IPR003591 -
Pral4923g00001 948 SMART LRR_typ_2 208 232 IPR003591 -
Pral4923g00001 948 SMART LRR_typ_2 447 471 IPR003591 -
Pral4923g00001 948 SMART LRR_typ_2 151 175 IPR003591 -
Pral4923g00001 948 SUPERFAMILY L domain-like 324 583 - -
Pral4923g00001 948 FunFam Nuclear pore complex protein NUP107 31 175 - -
Pral4923g00001 948 PRINTS Leucine-rich repeat signature 354 367 - -
Pral4923g00001 948 PRINTS Leucine-rich repeat signature 447 460 - -
Pral4923g00001 948 ProSiteProfiles Protein kinase domain profile. 672 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4923g00001 948 FunFam MDIS1-interacting receptor like kinase 2 753 946 - -
Pral4923g00001 948 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 279 595 - -
Pral4923g00001 948 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Pral4923g00001 948 Pfam Leucine rich repeat 352 412 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4923g00001 Pral-Chr4923 34039 37167 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4923g00001 27 846 Receptor kinase-like Gene Family AT4G08850 41.503 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4923g00001 Pkinase 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4923g00001 - - aprc:113866080 1210.28