Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4913g00017 ATGGCTCTGGTTTTTGAGTTTCGTTTCCTCTTGATCTCTCACCTTTTACTTGTTTCAGCTAGGTATGGACATGCGAGCCATAATAAGTGTCCTAGATCGTTTAACTGCGGAAAACCTGGGAGCATCCGGTTCCCTTTCACCAAGGTAGAAAGGCCAGACTGTGGCTTACTGATGGTTCGTAATTGTGATGATCCAAATGCATCTTCAGAAAAAATTATTGAACTAGAGAAGGAACCCTGGCAGCTTACTAGAGCCCCTCGCCAATCACATAGCGTTACGGTTTTCAACCCAGATTTACACACTCGCTTACAATCCAATGGCTCTTGTGAAGCCCTCAAGAATAATATCAGTCTTCCTGCGAAAGCACCTTTGATTTCTTCTTATATCAAATATAACATAACACTCTTTAAATGCCACCACCACCTCAATGTCAGCATCCCAACTGGTTTTATTAAAAATCCCTGTCCTGGTTTTGATATATATCATTACAGCCGAGACGCTAATCTTAAACCTGTCGAAGAAAGCTCCTTCTCAGCATGTTCAACTGTGGTGCTTCCCAAGAAAGACTGGCCTGATAGCACAGACCTTCAATCGTTCTTATCTGCACAAATGGCTCTTGAGGTACGATTGTCTGATGGTTGTGAGAAGTGTTACAACGACCAAGGAGGCTACTGTCGACTGGACAACAACAATAACTTCTACTGCGACAATGCAAGGAAACTTTGGAAGCTGGCACTGGGACTTGGGCTAGGTCTATTTGTTGGAGTTTTAGGCATGTTGATAGTTTGGCGGCGACTTCGACAGCATTACAAACGAAAGTATCCATCAGACAACCAATTGCAAGTAACAAGCAATTATGCAATTGATCCGTACTCCAATGCAGACCGAGAAAGTGGCAGAATCTACTTGGGGGTGCCACTCTTCTCGTACGAGGAGCTTAAGAAAGCAACAAATAACTTTGATCGTTCAAGAGAACTGGGAAATGGAGGCTTTGGCTCTGTTTACTATGGAAAACTCCAAGATGGGCGTGAAGTTGCAGTTAAGCGCTTATATGACCACAACTATCGGCGAGTTGAGCAATTCATGAATGAGATTGAGATGCTAACTCGCTTGCACCATCCAAACCTTGTGTCCCTCTATGGCTGCACTTCATGCCGTAGCTGTGAGCTTCTCCTTGTTTATGAATACGTTCCCAATAGAACAGTTTCTTGTCATCTCCATGGTGAACCAGCAAATCGCAGTTTACTACCATGGCCTGTAAGAATGAAAATTGCCATAGAAACTGCAACTGCATTGGCTTTTCTCCATGCTTCTGACACCATTCATCGAGATGTCAAAACTAACAACATCCTTCTTGACAATAACTTTTCAGTTAAGGTTGCAGATTTTGGACTTTCAAGATTGTTTCCTGATGATGTTACCCATGTTTCCACTGCCCCACAAGGGACTCCTGGTTATGTTGACCCAGACTATCACCAATGCTACCAGCTTACTAGCAAAAGTGATGTGTATAGCTTTGGGGTGGTGCTTATCGAACTGATATCATCTATGCCAGCAGTTGATATGAGCAGGCCTAGAGATGAGATAAATCTAGCAAATCTAGCTGTAAATAAGATTCAAAGAAGTGCATTTGGGGAGCTGGTGGATCCTTGTCTCGGTTTTGAGTCAGACAATGAGGTGAGGAGGATGATAGTTTCAGTGGCGGAGCTGGCTTTTCAGTGTTTACAAAAGGAAAAGGAATTGAGACCTTCCATGGATGAGGTTTTGGAGATTCTGGAGAGAATAGAGAGTGGGAATGAGGAGCTTAATCAGATTGAAGAAGTTGATGTTAATGGTGCTATTGGGATATCACACAGTGGTCCTTTACATTCATCTTCACCACCTTCACCGGATTGCGATGAGATCGGATTATTGAAAAGTATCACGTCATTGCCTTCACCTGCAGCCGTGACTGATAAATGGCATAGCGAATCAACTACAAATTTTGGGAGTTCTTAA 1998 0.4309 MALVFEFRFLLISHLLLVSARYGHASHNKCPRSFNCGKPGSIRFPFTKVERPDCGLLMVRNCDDPNASSEKIIELEKEPWQLTRAPRQSHSVTVFNPDLHTRLQSNGSCEALKNNISLPAKAPLISSYIKYNITLFKCHHHLNVSIPTGFIKNPCPGFDIYHYSRDANLKPVEESSFSACSTVVLPKKDWPDSTDLQSFLSAQMALEVRLSDGCEKCYNDQGGYCRLDNNNNFYCDNARKLWKLALGLGLGLFVGVLGMLIVWRRLRQHYKRKYPSDNQLQVTSNYAIDPYSNADRESGRIYLGVPLFSYEELKKATNNFDRSRELGNGGFGSVYYGKLQDGREVAVKRLYDHNYRRVEQFMNEIEMLTRLHHPNLVSLYGCTSCRSCELLLVYEYVPNRTVSCHLHGEPANRSLLPWPVRMKIAIETATALAFLHASDTIHRDVKTNNILLDNNFSVKVADFGLSRLFPDDVTHVSTAPQGTPGYVDPDYHQCYQLTSKSDVYSFGVVLIELISSMPAVDMSRPRDEINLANLAVNKIQRSAFGELVDPCLGFESDNEVRRMIVSVAELAFQCLQKEKELRPSMDEVLEILERIESGNEELNQIEEVDVNGAIGISHSGPLHSSSPPSPDCDEIGLLKSITSLPSPAAVTDKWHSESTTNFGSS 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4913g00017 665 SMART serkin_6 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4913g00017 665 Pfam Protein tyrosine and serine/threonine kinase 323 591 IPR001245 GO:0004672|GO:0006468
Pral4913g00017 665 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Pral4913g00017 665 Gene3D Transferase(Phosphotransferase) domain 1 397 610 - -
Pral4913g00017 665 SUPERFAMILY Protein kinase-like (PK-like) 303 593 IPR011009 -
Pral4913g00017 665 Gene3D Phosphorylase Kinase; domain 1 293 396 - -
Pral4913g00017 665 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 658 IPR044652 GO:0004672
Pral4913g00017 665 FunFam Wall-associated receptor kinase-like 20 397 605 - -
Pral4913g00017 665 FunFam receptor-like protein kinase FERONIA 288 396 - -
Pral4913g00017 665 ProSiteProfiles Protein kinase domain profile. 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4913g00017 Pral-Chr4913 210235 213869 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4913g00017 32 660 Receptor kinase-like Gene Family AT1G25390 47.270 5.14e-174 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4913g00017 PK_Tyr_Ser-Thr 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4913g00017 - - gmx:100791822 748.429