Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4913g00014 ATGCCTCCTCCTTGTCCTCTTAATCTTGACCAGATGCTAACCTATTTACCTGATTGCTCCGTTCTTCCCCTTCCTTGTAAGAACCTGACATATACCTCAGATTTTTCATCATTCTTATGCGGTGAAGTAGATATTGAAGTGCACGTATCTGGTGATTGTGATAAGTGTTACAACCGGAAGGGAGGCCAATGTCAAGTTGACGGCAACAATACCTTCCACTGCCACATAGGCCACATAGAGGACAGGCAGCCGAATTTGTGGTTTGGACTTGGGATTGGAGGTTTATTGATCGGACTGATATGCTGTCTAATCATAATTTGGCGGCAACGTAAGCAACATAACAAACATAAACATGCGTCTTCAAATGTCCAATTGCAATCAGCAAACAGTGATAGAATTGTTCGTAATACTGATCTAGAAAGTGGCATGGCTTACTTTGGGATACCCATCTTCTCTTACGAGGAGCTTGAAAATGCAACAAATAATTTTGATCATTCAAGAGAACTTGGAAGTGGAGGCTTTGGCAATGTTTATCATGGAAAACTTCGAGATGGACGAGAAGTTGCAGTGAAGCGACTATATGATCATAATTACAGACGAATAGAGCAGTTTATGAATGAAGTAAATATCCTGACTCGCTTGCGCCATCGAAACCTTGTGTCTCTCTATGGCTGCACTTCCCGCCATTGCCGAGAACTTCTGCTTGTGTATGAATATATTCCAAATGGAACCCTTTCCTATCATCTTCATGGTGAGCTAGCCAATTGTAGTTTACTTCCATGGCCGATAAGAATCAAGATAGCCATAGAAACTGCATCTGCATTAGCCTATCTTCATGCTTCTGACACCATTCATCGAGACGTCAAAACCAACAACATCCTCCTAAAAAATGATTTCTGTGTTAAGGTTGCTGATTTTGGGCTTTCAAGGTTGTTTCCCAATGATGTCACCCATGTTTCTACTGCCCCACAAGGGACAGCTGGCTATGTTGACCCAGAATATTACTACTGTTATCAACTTACCAACAAAAGTGATGTGTACAGCTTTGGGGTTGTGCTTATTGAACTGATATCATCTCTGCCTGCAGTGGATATCACAAGGGGTAAAGATGAGATAAACTTGGCAGATCTAGCTATGAATAAGATACAGAACAGTGCACTTAGGGAGCTAGTTGATCCTTGTCTTGGTTTTGAGTTAGATAGTGAGGTTAGGAGGATGATAGTCTCAGTTGCAGAGTTGGCTTTTCAGTGTTTGCAAAGGGACAAGGAATTGAGACCTTCCATGGACGAGGTTTTGCGGATACTAAGGAGAATAGAGAGTGGAAAGGAGGAAGAAAATCATGTAGAAGAAGTGGAAATCCATGGCGGCGTCAATGGCATTTCATGCAGTGGCCTAGTACTTTCACCATCACCACTTTCGCCAGATTCCGATGAATCTATATTGTTAAAATCTACAAAGTCACTGCCTCCGGCAACCAAAGCTCGCACCATAAATGTTATTAGTACCTAG 1509 0.4208 MPPPCPLNLDQMLTYLPDCSVLPLPCKNLTYTSDFSSFLCGEVDIEVHVSGDCDKCYNRKGGQCQVDGNNTFHCHIGHIEDRQPNLWFGLGIGGLLIGLICCLIIIWRQRKQHNKHKHASSNVQLQSANSDRIVRNTDLESGMAYFGIPIFSYEELENATNNFDHSRELGSGGFGNVYHGKLRDGREVAVKRLYDHNYRRIEQFMNEVNILTRLRHRNLVSLYGCTSRHCRELLLVYEYIPNGTLSYHLHGELANCSLLPWPIRIKIAIETASALAYLHASDTIHRDVKTNNILLKNDFCVKVADFGLSRLFPNDVTHVSTAPQGTAGYVDPEYYYCYQLTNKSDVYSFGVVLIELISSLPAVDITRGKDEINLADLAMNKIQNSALRELVDPCLGFELDSEVRRMIVSVAELAFQCLQRDKELRPSMDEVLRILRRIESGKEEENHVEEVEIHGGVNGISCSGLVLSPSPLSPDSDESILLKSTKSLPPATKARTINVIST 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4913g00014 502 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 30 483 IPR044652 GO:0004672
Pral4913g00014 502 Pfam Protein tyrosine and serine/threonine kinase 166 434 IPR001245 GO:0004672|GO:0006468
Pral4913g00014 502 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 135 239 - -
Pral4913g00014 502 FunFam Wall-associated receptor kinase-like 20 240 448 - -
Pral4913g00014 502 SUPERFAMILY Protein kinase-like (PK-like) 142 435 IPR011009 -
Pral4913g00014 502 ProSiteProfiles Protein kinase domain profile. 163 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4913g00014 502 ProSitePatterns Protein kinases ATP-binding region signature. 169 191 IPR017441 GO:0005524
Pral4913g00014 502 SMART serkin_6 163 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4913g00014 502 Gene3D Phosphorylase Kinase; domain 1 135 239 - -
Pral4913g00014 502 Gene3D Transferase(Phosphotransferase) domain 1 240 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4913g00014 Pral-Chr4913 167064 190489 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4913g00014 19 486 Receptor kinase-like Gene Family AT1G25390 53.165 1.37e-156 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4913g00014 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4913g00014 - - adu:107467171 550.051