Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4913g00004 ATGGCTGTGGTTCTTGAGTTTTGTTTCCTCTTGGTTTCTCATCTTTTACTTCTTTCAGTTGGGTATGGAAATGCGAGTCATATTAAGTGTCTTGGATCTTTTAATTGCGGAGAACTTGGAAGCCTCCAGCTCCCTTTCACCAAGCCAGAATTGCCGGACTGTGGCTTAATGGTTGTTCATAACTGTGATGCTTCAGATAAACCGATTGAACTAGAGAAGAATGGATCAAGATCATTCTTGCAGCTTAAGGCTGTCTTTCTGCAGCAAAGTCTGATTACGGTTTTTGACCAGGATCTACACAATCGTTTGCAATCCAATGGTTCTTGTGAAGCCTTCAACCACAATATCTCAATCCCTGCAAGCTCTCCTTTGATTTCTTTTGATATTAAATACAACATAACCCTGTTTAAATGCAACCACCAACTCAATGTCAGCACCCCCTCTGGTTTTATTAAACATCCCTGTGCAAACTTCGATATCTATCATTACCGCCTGCTCTCTGATCCTCAGCCTCGCAACAAAAGCCATTTCTCATCATGTTCAAATCTTGTGCTTCCAAAAAAAGACCTGCCTGATACCACTGACCTTCAATCGTTCTTATCTGCTCAAATGACTCTGGAGCTACGAATATCTGATGCTTGTGATCAGTGCCACAGCAGCGGAGGCCAATGTCAACTTGACAGGAACAATAACTTCTACTGCGCCAGAGGAGTTTTGGCAGCTGTAACAGTAGGAGTTTTTGTTCTTATAATCTACTTGTTTAGAAGGACATTATTCCGAAAAAACAAATCTAAAACTCATCGAGATTTTGAGGCCTTTCTAAAGAGTCATGGATCACTTGCCACAAAAAGATATAGCTACTCGGAGATAAAGAAAATGACCAGTTGTTTCAAAGAAAAATTAGGGCAAGGAGGCTATGGAAGTGTGTTCAAAGGGAAGTTAACGGACAAATCTCTAGTTGCTGTGAAGGTTTTGAATGAAACAAAAGGTAACAGAGAGGAATTCATCAACGAGGTAGCAAGTATAAGCAAGACTTCTCATGTTAACATCGTCACTCTTTTAGGATTTTGTTTTGAAGGGTCCAAGAAGGCACTTATTTATGAGTTTATGGCTAATGGATCATTAGAGAAATTCATCTTTGAAAATGAAGCAAACCTCCTGAATGATAATCTCCAACTGAGCTGTGAAATATTGCATCAAATTGCAGTCAGTGTTGCACGAGGATTAGAGTATTTGCACAAAGGATACTTTGGACTAGCTAAAATATGCCTAAGAAATGAGAGTGTGGTATCTATGACGTGTGCTCGAGGAACCATAGGATATATTGCTCCCGAGGTAATTTCTAGAAATTTTGGTGTAGTCTCTCACAAGTCAGATGTTTATAGTTTTGGGATGATGATTCTTGAAATGGTTGGAGGAAGAAGGAATGTCAACGTCAATGTTGATAATAGCAGTGAAATATATTTTCCTCATTGGATTTACAAGCGGCTAGAATTGAATGAAGAACTTGCGCTGAGGAGCATTGGAAATGAAGGTGACAAAGAGAGGATAAGACAAATGGTGATCACAAGCTTATGGTGCATACAAACTAACCCTTCAGACCGTCCAATGATGAGTAAAGTGGTGGAGATGCTTGAAGGCAGAGTTGAGACCTTGCAAGTTCCACCAAAACCTTACTTATCATCTCTTTCAGCATCACCATGCCATTCGTCTTCCTCAACTCACTGA 1728 0.4005 MAVVLEFCFLLVSHLLLLSVGYGNASHIKCLGSFNCGELGSLQLPFTKPELPDCGLMVVHNCDASDKPIELEKNGSRSFLQLKAVFLQQSLITVFDQDLHNRLQSNGSCEAFNHNISIPASSPLISFDIKYNITLFKCNHQLNVSTPSGFIKHPCANFDIYHYRLLSDPQPRNKSHFSSCSNLVLPKKDLPDTTDLQSFLSAQMTLELRISDACDQCHSSGGQCQLDRNNNFYCARGVLAAVTVGVFVLIIYLFRRTLFRKNKSKTHRDFEAFLKSHGSLATKRYSYSEIKKMTSCFKEKLGQGGYGSVFKGKLTDKSLVAVKVLNETKGNREEFINEVASISKTSHVNIVTLLGFCFEGSKKALIYEFMANGSLEKFIFENEANLLNDNLQLSCEILHQIAVSVARGLEYLHKGYFGLAKICLRNESVVSMTCARGTIGYIAPEVISRNFGVVSHKSDVYSFGMMILEMVGGRRNVNVNVDNSSEIYFPHWIYKRLELNEELALRSIGNEGDKERIRQMVITSLWCIQTNPSDRPMMSKVVEMLEGRVETLQVPPKPYLSSLSASPCHSSSSTH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4913g00004 575 Gene3D Transferase(Phosphotransferase) domain 1 370 554 - -
Pral4913g00004 575 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Pral4913g00004 575 Gene3D Phosphorylase Kinase; domain 1 271 369 - -
Pral4913g00004 575 ProSiteProfiles Protein kinase domain profile. 295 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4913g00004 575 Pfam Protein kinase domain 417 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4913g00004 575 SUPERFAMILY Protein kinase-like (PK-like) 278 546 IPR011009 -
Pral4913g00004 575 PANTHER RUST RESISTANCE KINASE LR10-RELATED 417 564 IPR045874 GO:0004672
Pral4913g00004 575 FunFam S-receptor-like serine/threonine-protein kinase 261 369 - -
Pral4913g00004 575 Pfam Protein tyrosine and serine/threonine kinase 297 415 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4913g00004 Pral-Chr4913 67138 69960 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4913g00004 219 560 Receptor kinase-like Gene Family AT4G18250 46.316 7.49e-100 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4913g00004 PK_Tyr_Ser-Thr 3.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4913g00004 - - pcin:129284583 765.763