Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4913g00002 ATGACCAATTGTTTCCAAGAAAAATTAGGGCAAGGAGGCTATGGAAGTGTGTTCAAAGGGAAGTTACATGATGAGTGTCTAGTTGCTGTGAAGGTTTTGAATGAAACAAAAAGTAATGGGGAGGAATTCCTCAATGAGGTAGCAAGTATAAGCAAGACTTCCCATGTTAACATTGTCACTCTTCTGGGACTTTGTTTTGAAGGACCAAAGAAGGCACTTGTTTATGAGTTTATGGCTAATGGATCATTAGAGAAGTTCATCTTTGAAAATGAAGCCAACCTCCTTAATGGTAACCTCCAATTGAGCTGTGAAATATTGCATCAAATTGCAGTGGGTGTTGCACGAGGACTAGAGTATTTGCACAGAGGATGTAATGCTCGAATATTGCATTTTGACATAAAACCTCACAACATTTTATTGGATGAGAACTTTTGCCCGAAGATCTCTGATTTTGGATTAGCAAAAATATGTCCTAGAAATGAAAGTGCTGTATCCATGTGGGGTGCCAGAGGAACTATCAGATATATTGCTCCTGAGGTAATTTCTAGAAATTTTGGTGTCGTCTCTCACAAATCAGATGTTTATAGTTTTGGGATGATGGTTTTAGAAATGATTGGAGGAAGAAGGAATGTTAATGTCAATGTTAACAATACTAGTGAAATATATTTTCCTCATTGGATTTACAAGCGTTTAGAATTCAATGAAGACCTTGCACTGAGGAGCATTAGAAATGAAACTGACCAAGAGAGGATAAGACAGATGTTTATAACAAGCTCATGGTGCATACAAACTAACCCTTCAAATCGTCCAGTGATGAATAAAGTGGTGGAGATGCTTGAGGGCAGAGTTGGGACCTTGCAGGTCCCACCTAAGCCTTACTTATCATCTCCTTCAAGAATAGTCTTAGACTCGGCTATAATAACCAAAGATTTTCAGTGTTTTCTTGCGTTCATCTTATGGTGGACCAGTCCAAGAAAGTGCTATAATGTGAAGAAAAAGCAAACCAAATTGGGATGA 1017 0.3825 MTNCFQEKLGQGGYGSVFKGKLHDECLVAVKVLNETKSNGEEFLNEVASISKTSHVNIVTLLGLCFEGPKKALVYEFMANGSLEKFIFENEANLLNGNLQLSCEILHQIAVGVARGLEYLHRGCNARILHFDIKPHNILLDENFCPKISDFGLAKICPRNESAVSMWGARGTIRYIAPEVISRNFGVVSHKSDVYSFGMMVLEMIGGRRNVNVNVNNTSEIYFPHWIYKRLEFNEDLALRSIRNETDQERIRQMFITSSWCIQTNPSNRPVMNKVVEMLEGRVGTLQVPPKPYLSSPSRIVLDSAIITKDFQCFLAFILWWTSPRKCYNVKKKQTKLG 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4913g00002 338 SMART serkin_6 3 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4913g00002 338 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Pral4913g00002 338 Gene3D Phosphorylase Kinase; domain 1 4 81 - -
Pral4913g00002 338 PIRSF ILK 4 287 - -
Pral4913g00002 338 Gene3D Transferase(Phosphotransferase) domain 1 82 286 - -
Pral4913g00002 338 Pfam Protein tyrosine and serine/threonine kinase 5 279 IPR001245 GO:0004672|GO:0006468
Pral4913g00002 338 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 296 IPR045874 GO:0004672
Pral4913g00002 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Pral4913g00002 338 SUPERFAMILY Protein kinase-like (PK-like) 5 280 IPR011009 -
Pral4913g00002 338 FunFam PR5-like receptor kinase 78 291 - -
Pral4913g00002 338 ProSiteProfiles Protein kinase domain profile. 3 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4913g00002 Pral-Chr4913 42496 46357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4913g00002 1 294 Receptor kinase-like Gene Family AT4G18250 55.629 3.18e-113 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4913g00002 PK_Tyr_Ser-Thr 9.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4913g00002 - - pcin:129284583 483.796