Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4913g00001 ATGACCAGTTGTTTCAAAGAAAAATTAGGGCAAGGAGGCTATGGAAGTGTTTTCAAAGGGAAGTTAATGGACAAATCTCTAGTTGCTGTGAAGCTTTTGAACGAAACAAAAGGTAATGGAGAGGAATTCATCAATGAGGTAGCAAGTATAAGCAAGACTTCTCATGTTAACATCGTCGCTCTTTTAGGATTTTGTTTAGAAGGGTCCAAGAAGGCACTTATTTATGAGTTTATGGCTAATAGGTCATTAGAGAAGTTCATCTTTGAAAATGAAGCAAACCTCCTTAATGGTAATCTCCAACTGAGCTGTGAAATATTGCACCAAATTGCAATAGGTGTTGCACGAGGACTAGAGTATTTGCATAGAGGGTGTAACACTCGGATATTGCATTTTGACATAAAACCTCACAATATTTTGTTGGATGAGAACTTTAGCCCAAAGATCTCAGACTTCGGACTAGCTAAAATATGCCTAAGAAATGAGAGTGTTGTATCCATGACAGGTGCTAGAGGAACCATAGGATATATTGCTCCCGAGGTAGTTTCTAGGAATTTTGGAGTTGTCTCTCAAAAGTCAGATGTTTATAGCTTTGGGATGATGATTTTTGAAATGGTTGGGGGAAGAAGGAATGTCAATGTGAATGTTGATAATAGTAGTGAAATATATTTTCCTCACTGGATTTACAAGCGTCTAGAATTGAATGAAGACCTTGCGCTGAGGAGCATTAGAATTGAAGGTGACAAAGAGAGGATAAGACAGATGGTGATAACTAGCTTATGGTGCATACAAACTAACCCTTCAAACCGTCCAATGATGAGTAAAGTGGTAGAGATGCTTGAAGGCAGAGTTGAGACCTTGCAAGTTCCACCAAAACCTTACTTATCATCTCCTTCAACATCACCGCGTTCTTCTTCTTCCTCAACTCACTGA 930 0.3882 MTSCFKEKLGQGGYGSVFKGKLMDKSLVAVKLLNETKGNGEEFINEVASISKTSHVNIVALLGFCLEGSKKALIYEFMANRSLEKFIFENEANLLNGNLQLSCEILHQIAIGVARGLEYLHRGCNTRILHFDIKPHNILLDENFSPKISDFGLAKICLRNESVVSMTGARGTIGYIAPEVVSRNFGVVSQKSDVYSFGMMIFEMVGGRRNVNVNVDNSSEIYFPHWIYKRLELNEDLALRSIRIEGDKERIRQMVITSLWCIQTNPSNRPMMSKVVEMLEGRVETLQVPPKPYLSSPSTSPRSSSSSTH 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4913g00001 309 FunFam PR5-like receptor kinase 78 291 - -
Pral4913g00001 309 SMART serkin_6 3 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4913g00001 309 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Pral4913g00001 309 PIRSF ILK 4 288 - -
Pral4913g00001 309 MobiDBLite consensus disorder prediction 291 309 - -
Pral4913g00001 309 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Pral4913g00001 309 SUPERFAMILY Protein kinase-like (PK-like) 5 280 IPR011009 -
Pral4913g00001 309 MobiDBLite consensus disorder prediction 288 309 - -
Pral4913g00001 309 Gene3D Transferase(Phosphotransferase) domain 1 78 288 - -
Pral4913g00001 309 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 300 IPR045874 GO:0004672
Pral4913g00001 309 ProSiteProfiles Protein kinase domain profile. 3 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4913g00001 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Pral4913g00001 309 Pfam Protein tyrosine and serine/threonine kinase 5 279 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4913g00001 Pral-Chr4913 18226 19170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4913g00001 1 294 Receptor kinase-like Gene Family AT4G18250 55.960 1.61e-115 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4913g00001 PK_Tyr_Ser-Thr 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4913g00001 - - pcin:129284583 489.96