Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4912g00004 ATGGTCATTGAAGTACAGTTATCTGATGCTTGTGATAAGTGTTACAACCAGATAGGTGGCCAATGTCGACTTGACAGCAATAGAAACTTCTATTGTGACAGAGAGAAAACTGGAAAAACCGTGCTCATTGGGACAACAGTGGCTTCTTCTGCGGGACTTGCTGTGCTATTGTTCCTGGCCTTTTGCTCTAGAAGAAAGCTTCTTGCTCTTGCTTCATCCAATCTCTTTTGGAGGAAGAGACATGCAACCCGTCAAATAACTGAAGCCGCTCTGGAGCAACATGGACCAATCTCTTGTAGACAGTACAGTTACTCTGAGATAAAGAAAATCACAGACTGTTTCAAAACCAAATTAGGCAAAGGAGGATATGGAACTGTATATAAAGGGAAGCTACCAGATGAGCGTCTTGTTGCGGTGAAAGTGCTAAGTCAGTTAAAATGTATGAATGAGGAATTCATTAATGAAGTTGCAAGTATCAGCAGGACATCTCATGTTAATATTGTTAGCCTTTTAGGCTTTTGTTTCCAAGATTCGAAAAGAGCTCTAGTTTATGAGTTTATGTCTAATGGATCTCTCGAGAAATTCATATATGAGAAGTCTGATTGCAGCATGGCTGAACACCAATTGGACTGTCAAACTCTATATAATATTGCAGTTGGTGTTGCTAAAGGATTAGAGTACTTACACAGAGGTTGTAACAAGACCAAAATCCTGCACCTTGACATAAAACCTCATAACATCCTACTCGATAAGGAGTTTTGCCCAAAAATTTCAGATTTTGGACTCGCTAAAATACTGCCAATAAAAGATTGGATTGTGTCCATATTGGAAGCAAGGGGTACTGCAGGATACATTGCTCCAGAAGTATTTTCAAGAAACTATGGCAACGTATCTCACAAATCAGATGTCTTCAGTTTTGGAATGGTGGTTCTAGAAATGGTTGGAGGAAGAAGGAACATGAATGCTGAAGTTGATCATTCCAGTGAAATTTATGTTCCACAATGGATTTATAAGCGCCTTGAACTGAATCAAGAACTAGAATTGGGATGCATTAGGAATGATACTGAAAAAGAAATGGTGAGAAAAATGATAATGGTGAGCTTATGGTGCATACAAACTGACCCTTCAATGAGACCAGCAATGAGTGAAGTAGTGGAGATGTTGGAAGGAAGCTTGGAAACCCTGCAAGTACCTCCTAAGCCGTTTTTCTTTTCTTCTTCAACAACTCCTGTTCATTCCACATCTCAACCATGTGAGATTGTGCAGTTATAG 1272 0.3954 MVIEVQLSDACDKCYNQIGGQCRLDSNRNFYCDREKTGKTVLIGTTVASSAGLAVLLFLAFCSRRKLLALASSNLFWRKRHATRQITEAALEQHGPISCRQYSYSEIKKITDCFKTKLGKGGYGTVYKGKLPDERLVAVKVLSQLKCMNEEFINEVASISRTSHVNIVSLLGFCFQDSKRALVYEFMSNGSLEKFIYEKSDCSMAEHQLDCQTLYNIAVGVAKGLEYLHRGCNKTKILHLDIKPHNILLDKEFCPKISDFGLAKILPIKDWIVSILEARGTAGYIAPEVFSRNYGNVSHKSDVFSFGMVVLEMVGGRRNMNAEVDHSSEIYVPQWIYKRLELNQELELGCIRNDTEKEMVRKMIMVSLWCIQTDPSMRPAMSEVVEMLEGSLETLQVPPKPFFFSSSTTPVHSTSQPCEIVQL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4912g00004 423 Pfam Protein kinase domain 115 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4912g00004 423 CDD STKc_IRAK 118 390 - -
Pral4912g00004 423 PANTHER RUST RESISTANCE KINASE LR10-RELATED 88 407 IPR045874 GO:0004672
Pral4912g00004 423 SMART serkin_6 112 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4912g00004 423 FunFam S-receptor-like serine/threonine-protein kinase 80 186 - -
Pral4912g00004 423 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Pral4912g00004 423 ProSiteProfiles Protein kinase domain profile. 112 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4912g00004 423 Gene3D Phosphorylase Kinase; domain 1 85 186 - -
Pral4912g00004 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Pral4912g00004 423 SUPERFAMILY Protein kinase-like (PK-like) 100 414 IPR011009 -
Pral4912g00004 423 Gene3D Transferase(Phosphotransferase) domain 1 187 397 - -
Pral4912g00004 423 FunFam PR5-like receptor kinase 187 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4912g00004 Pral-Chr4912 34312 37200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4912g00004 75 417 Receptor kinase-like Gene Family AT5G38260 53.179 3.49e-121 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4912g00004 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4912g00004 - - gmx:100785979 501.901