Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4911g00020 ATGGAGGATCACCAGATTCTCTACCCTTCTAAACCAGCAAACCCCTTAAAGCTTTTCGGCTTCAGCGTCCACCACCAGCCACACGGACTTCGAGTTGAAGACGACGACGAGGTGCTTGCAGATGATGTCTCAGGCCCAATCTCCAAGCAAACTTCCCCGTCTGGATCGCCGGATTCCGCAGCATCCGCCGGTGGTGGAGCTTTCCCTGCTTCCTCCGGCGACAGGAAATACGAGTGTCAGTATTGTTGTCGCGAGTTTGCCAACTCGCAGGCCCTCGGTGGCCACCAGAACGCTCACAAGAAAGAGCGCCAGCAGCTGAAGCGAGCCCAGTTGCAAGCTTCACGAAACGCCGCCGTTTCGTTCGTGAGGAACCCGATAATCTCTGCCTTCGCCCCTCCGCCTCATTTGCTTTCTCCGGCGGGCCACGTCATGGTTCCGGCAGGTACTCCGTCGTCCTGGGTCTATGTTCCGCCACGTGCAGCTCCTCAGCCGTTCCACGTGTCGGTATCACACGGCTGCGTGTTCCCTTCGTCAACGAATAGTACTTTCTGTGGTAGTAATACTAGTCAGAGTGGGAGATCGGCGGCCGCCGGGATGTTATCCTGTGGTGGCAGCGCAGGGGAGTCCATGGGATCTCAAGTACATGGTAGGGCCCATGGGCCATCTTTAAGTAGATTTTCGAAAGGGGATGGTGGGCCCAACTTCGATGACCCATTGGGCTTGGACTTACATCTAAGCCTTGCGCCAGCTGCGCCGTGA 759 0.5705 MEDHQILYPSKPANPLKLFGFSVHHQPHGLRVEDDDEVLADDVSGPISKQTSPSGSPDSAASAGGGAFPASSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSFVRNPIISAFAPPPHLLSPAGHVMVPAGTPSSWVYVPPRAAPQPFHVSVSHGCVFPSSTNSTFCGSNTSQSGRSAAAGMLSCGGSAGESMGSQVHGRAHGPSLSRFSKGDGGPNFDDPLGLDLHLSLAPAAP 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4911g00020 252 SUPERFAMILY beta-beta-alpha zinc fingers 73 104 IPR036236 -
Pral4911g00020 252 Gene3D Classic Zinc Finger 68 124 - -
Pral4911g00020 252 MobiDBLite consensus disorder prediction 45 59 - -
Pral4911g00020 252 PANTHER ZINC FINGER PROTEIN 5 12 251 IPR044299 GO:0010090
Pral4911g00020 252 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Pral4911g00020 252 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Pral4911g00020 252 MobiDBLite consensus disorder prediction 205 237 - -
Pral4911g00020 252 MobiDBLite consensus disorder prediction 34 69 - -
Pral4911g00020 252 FunFam Zinc finger protein 6 69 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4911g00020 Pral-Chr4911 229134 230147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4911g00020 16 250 C2H2 Transcription Factor Family AT1G68360 47.170 4.90e-53 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4911g00020 - - gmx:100811796 298.13