Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4911g00012 ATGGAGGAAAATTCCTCATCCAATATTCAACAACTCATGGCTCTCTTCAATGGTTCCTTCTCGGATCAACACCTTAATCTCCCTCTCGGCCCCAACAATATTTATCCACAGGCTCTTCACTCTTCTGTCTCTCCTAATTATGTTCACCAAGATGTAGAAACGTGGCCTATATCAGAAACCTTGCTGGATTCTTCTCCTCCATTTTCTGCAACTTCTTCTGCTGACAAGAACAAGAGCCTGGTTATGAGCAAAAGGAAGAGAAAAAACAGTGACAGACTAGAATTTGAAGAGAAACCAAAAGACGTCATCCATGTAAGAGCGAAAAGAGGCCAAGCAACTGATAGCCACAGTTTAGCAGAAAGGGTGAGGAGAGAGAAAATCAACGAGAAGCTAAGATGTTTGCAAGAATTAGTTCCAGGTTGCTACAAGACAATGGGTATGGCGGTGATGTTAGATGTGATCATAGATTATGTTCAATCTCTGCAACAACAGATTGAGTTTCTTTCCATGAAGCTTACAGCAGCAACCATGCATTATGATTTCCACGCTTCTGAGTTCAATGTCACCGAAACCTTCCCGAGGAACGATAATAACAGTACTTGGCAAGCCCAAGAGATGGAGAAGAATATGGGAGAAGAAGGCTATGGAGGGTACTCTTATTTCAATCCAACGTGGCCACTTCATTAA 687 0.4221 MEENSSSNIQQLMALFNGSFSDQHLNLPLGPNNIYPQALHSSVSPNYVHQDVETWPISETLLDSSPPFSATSSADKNKSLVMSKRKRKNSDRLEFEEKPKDVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQELVPGCYKTMGMAVMLDVIIDYVQSLQQQIEFLSMKLTAATMHYDFHASEFNVTETFPRNDNNSTWQAQEMEKNMGEEGYGGYSYFNPTWPLH 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4911g00012 228 CDD bHLH_AtBPE_like 101 186 - -
Pral4911g00012 228 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 109 180 IPR036638 GO:0046983
Pral4911g00012 228 FunFam Transcription factor BEE 3 111 174 - -
Pral4911g00012 228 Gene3D - 111 174 IPR036638 GO:0046983
Pral4911g00012 228 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 111 161 IPR011598 GO:0046983
Pral4911g00012 228 MobiDBLite consensus disorder prediction 66 92 - -
Pral4911g00012 228 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 206 IPR024097 GO:0006355
Pral4911g00012 228 Pfam Helix-loop-helix DNA-binding domain 115 162 IPR011598 GO:0046983
Pral4911g00012 228 SMART finulus 117 167 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4911g00012 Pral-Chr4911 151670 152942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4911g00012 97 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 62.595 1.02e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4911g00012 HLH 2.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4911g00012 - - qsa:O6P43_025724 217.624