Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4911g00005 ATGACATTTCCTTTTTTCTCTGCTCACTGTTCCCACCATTGCTCCTCCTTTCGATTTCACCGTTCACCCATTACTCTGTTTTCTTCTTCCTCTATCAGAAGAAACCGCTGGCTCCGCATGGATGCTGGCCCCATCTTCAGCCGCAACCGCTGGAAAGAGAAGGTGATTGTCATAATGGGTGCCACCGGAGCCGGGAAATCCAGCCTCTCCATCGACCTCGCAACCCGTTTCCCCTTCTCCGAGATCATTAACTCGGATAAAATGCAAGTTTACACAGGCCTCGACATCACCACCAACAAGATCCCCATTGAGGAGCGCAAAGGCGTCCCTCATCATCTCCTCGGCGATGTCGACCCACAAAACGGAGAGTTCACGCCTTTAGATTTTCGCTTGCGCGCCGGCTCTGTCATCTCCGACATTACTTCCAGGAGGAAGATTCCCATCGTTGTTGGTGGGTCTAACTCGTTCGTTCACGCTCTGCTCGCGGACCGATTCGACCCCGAGATAAATGTATTCGATGGGTCGTCATCGTCGTCGAGTTTGATCTCATCGGAGTTGAGATACGATTGCTGCTTCTTGTGGGTGGACGTGTCATTTCCTCTGTTGTCAGATTACTTGATGAAGCGAGTCGACGACATGCTCGACATGGGAATGGTGGAAGAGTTAGCCGAGTTTTTCAACCCGGACGCCGACGATTTAGAGGATGACTCGGAGAATCGAACCGGATTGAGAAAGGCCATCGGTGTGCAGGAGTTCGATCCGTATTTCAAAAGATACCCCCCACCGGCAGGGCTGAGCGCGGAGTGTACATGCGAAGAGGATCGGGTACGGAAGGGGGCATACGAAGACGCCGTAAGAGCGATAAAGGACAACACGGGTCGGCTTGTGAAAAAACAGATAGAGAAAATCTTACGGCTAAGAGGGTCAGGGTGGGACCTACGGAGAGTGGACGCGACGGAGGTGTTCAGGGCGAAGTTGGGAAAGAGCAGCGGCGGAAGGTGGTCTGAAATTTGGGAGAGGGAGGTGCTGGAGCCAAGCGTGAAGATTGTGAGTAGCTTCTTGCGGGAGTAG 1071 0.5285 MTFPFFSAHCSHHCSSFRFHRSPITLFSSSSIRRNRWLRMDAGPIFSRNRWKEKVIVIMGATGAGKSSLSIDLATRFPFSEIINSDKMQVYTGLDITTNKIPIEERKGVPHHLLGDVDPQNGEFTPLDFRLRAGSVISDITSRRKIPIVVGGSNSFVHALLADRFDPEINVFDGSSSSSSLISSELRYDCCFLWVDVSFPLLSDYLMKRVDDMLDMGMVEELAEFFNPDADDLEDDSENRTGLRKAIGVQEFDPYFKRYPPPAGLSAECTCEEDRVRKGAYEDAVRAIKDNTGRLVKKQIEKILRLRGSGWDLRRVDATEVFRAKLGKSSGGRWSEIWEREVLEPSVKIVSSFLRE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4911g00005 356 Gene3D - 52 354 IPR027417 -
Pral4911g00005 356 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 52 354 IPR039657 -
Pral4911g00005 356 Pfam IPP transferase 185 300 - -
Pral4911g00005 356 Pfam IPP transferase 89 165 - -
Pral4911g00005 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 234 IPR027417 -
Pral4911g00005 356 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 199 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4911g00005 Pral-Chr4911 98801 100031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4911g00005 171 354 C2H2 Transcription Factor Family AT2G27760 28.019 7.32e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4911g00005 K10760 - qsa:O6P43_025717 456.832