Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral490g00010 ATGTTAGAGAACTCGACTTCGAGTTTACCCGAAAACTCCATTCAACAGCGGAGGCACGCAGAGGAGGATGGTGGTAAGCCTGTCTCTGATGGACACCAAGACGAAGACGTTGACCGGAATGTCACCGGTGGCCGGTGGCCTCCAGAAGAGACTAAAGCTTTGCTCCAGATAAGGTCTGACATGGACGCTGATTTCAGGGATACCTTACCCAAAGTTCATCTTTGGCAACAAGTTTCCAGGAGATTACGGGGGCTAGGATATAATAGGAGTGCTAAGAAGTGCCAGGAGAAGTTTGAAAACGTGTACAAGTACTACAGAAGGACCAAGGAAGGTCGTTATGGCCGACCCAACGGCAAGACTTACCGATTCTTTGAGCTTTTAGAGCCTCTTATGAACTCTCCTTACCCTGAAAAGGATGAAGAACAAGCGAGAAATACAGCAACAACCACAACCCCAATGGATTTGTCCGATGTTATTCATGGTGCTATTCAACATCCTTACCCCGAAAAGAATGAAGAACAGGCGGAAAACATAGCCACAACTACAACCCCAATGGATTTGTCCAATGTTATTCAAGATTCATTCCCATTTTCCATTCGGTTCTCTAGTGCCCCCTCTAGTTCAACTACTCCCTCTTCGAGCGAAGAATCAGAGGAAGACATTCGAAAGAAGAAAAGGAAACTGACGAAGTGTTTTGAGGGGTTGATGAACAAAGTACTAGAGAGGCAAGTGGAGCTACAGAAGAACTTTATGGAGGTTTTAGTCAAATGCGAACAAGAGAGAATGGCAAGAGAGGAAGCATGGAAGATGCAGGAATTAGCTAGGATTAAGAGGGAACGAGAGCTTTTAGCTCAGGAAAGATCAATTGCTGCGGCAAAAGATGCAGCAGTGCTTGCCCTTCTGAGTAAGTTCACAGGACAAACGGGGACCATAGAATTACCTGAGAATCTACTTCCTAACGATTTAGATAAGGACGAGCAAGAAAATGATAATGCAGGCAGTAGTGTTCTTGAAAAGCAAGAATGTAGAAATGGTGGGAATTTCACACTGACGAGTCCATCTTCCTCTAGATGGCCCAAAGATGAAGTGGAAGCTTTCATTAGATTGAGGACAAACTTGGATGTGGAGAATGAAGGAAATGGGCTTAAAGGGTCTAATCCTATATGGGAGGAGATATCTTGTGCAATGAAGAAACTTGGGTACGATCGGAGTGCCAGGAGATGCAAGGAGAAATGGGAGAATATGAACAAATACTTCAAGAGGATGAAGAAGAAAAACCAGAAAAAGCCTCAGAGTTCTAAAACATGTCCTTATTTTCATCAGTTGGATGCTCTGTATAATAGTGAAAGGCCTAATGAGAAGTTGGAGGATTCAGCCAGTTCTCATAAGGATCAACTGAAGCCTGAGAAGCCACTAATGCATCTTATGGAGGGTCAGTCCCAGTCATCATCAGAGGATGCTGACAGCGATGGAGGATCAGAATAA 1485 0.4424 MLENSTSSLPENSIQQRRHAEEDGGKPVSDGHQDEDVDRNVTGGRWPPEETKALLQIRSDMDADFRDTLPKVHLWQQVSRRLRGLGYNRSAKKCQEKFENVYKYYRRTKEGRYGRPNGKTYRFFELLEPLMNSPYPEKDEEQARNTATTTTPMDLSDVIHGAIQHPYPEKNEEQAENIATTTTPMDLSNVIQDSFPFSIRFSSAPSSSTTPSSSEESEEDIRKKKRKLTKCFEGLMNKVLERQVELQKNFMEVLVKCEQERMAREEAWKMQELARIKRERELLAQERSIAAAKDAAVLALLSKFTGQTGTIELPENLLPNDLDKDEQENDNAGSSVLEKQECRNGGNFTLTSPSSSRWPKDEVEAFIRLRTNLDVENEGNGLKGSNPIWEEISCAMKKLGYDRSARRCKEKWENMNKYFKRMKKKNQKKPQSSKTCPYFHQLDALYNSERPNEKLEDSASSHKDQLKPEKPLMHLMEGQSQSSSEDADSDGGSE 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral490g00010 494 MobiDBLite consensus disorder prediction 15 45 - -
Pral490g00010 494 MobiDBLite consensus disorder prediction 1 52 - -
Pral490g00010 494 ProSiteProfiles Myb-like domain profile. 356 416 IPR001005 -
Pral490g00010 494 PANTHER FI21293P1 19 484 - -
Pral490g00010 494 CDD GT1 356 419 - -
Pral490g00010 494 MobiDBLite consensus disorder prediction 315 338 - -
Pral490g00010 494 MobiDBLite consensus disorder prediction 201 222 - -
Pral490g00010 494 ProSiteProfiles Myb-like domain profile. 38 102 IPR001005 -
Pral490g00010 494 FunFam Trihelix transcription factor GT-2 358 421 - -
Pral490g00010 494 FunFam Trihelix transcription factor GT-2 46 107 - -
Pral490g00010 494 MobiDBLite consensus disorder prediction 476 494 - -
Pral490g00010 494 MobiDBLite consensus disorder prediction 447 494 - -
Pral490g00010 494 SMART sant 354 418 IPR001005 -
Pral490g00010 494 SMART sant 42 104 IPR001005 -
Pral490g00010 494 CDD GT1 45 109 - -
Pral490g00010 494 MobiDBLite consensus disorder prediction 421 440 - -
Pral490g00010 494 MobiDBLite consensus disorder prediction 447 471 - -
Pral490g00010 494 MobiDBLite consensus disorder prediction 318 332 - -
Pral490g00010 494 Pfam Myb/SANT-like DNA-binding domain 356 445 IPR044822 -
Pral490g00010 494 Pfam Myb/SANT-like DNA-binding domain 45 128 IPR044822 -
Pral490g00010 494 Gene3D - 46 107 - -
Pral490g00010 494 Gene3D - 358 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral490g00010 Pral-Chr490 53764 56541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral490g00010 43 447 Trihelix Transcription Factor Family AT1G76890 43.267 8.49e-109 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral490g00010 Myb_DNA-bind_4 7.6e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral490g00010 - - pcin:129299456 721.85