Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4907g00028 ATGGCCTCCGATGCACATGGCTCCCGTCACAAGCACCGGCGCTCATCTTCTCCCGAAGAAGTCGAGCGATCCTCTAAACGTCACAAGCACCGCCACCATGGCCACCGCCATCATCGGCACCGCCACGCTAGCAGGAAACACGAAGAGGAGCATGAACTCGATGCCGAAACTGTTAATAAGGTTCCTTCCCCAACTCTTGGTCCTGAGTCTGACAGGCCTGATGATGATGTGGAGGAGGGGGAGATTCTTGAAGAGGAGGGTCCCGGTGGCCGAGATGGTGAGATTGGAAAAAAGCATACGGAGTCCGATGCTGAGTCTGGTGAAATCATGGCCACGGGAGGTCGAGGTATTCGATCCGATAATTCAAATCCGGTACCTTCCACCGAAGAGATGTTGCATGGGAAGGACGCCATTCCCTCTAAAGAGAAAGTAGTGACTACTGCTAAAGGTTTAGAAACTAATAGTGAGGATATCAACAATGGTAGATTTATTAGTCCACGATTGGATGGAGAAGATGATACTCGCCATCAGGGACACACTGGTCACAGTAGAAATGAAGTTGATGGTTCTCCTACTCATTCAAGTGCGGAGTCCGTAGATGCTAAGCATGCTAGAGCTATTTCGGATGGTTTGGGCAATGGGTATTTGGATCGTAAATCTTCCAAAGAGGATAAATGGCCGCATGGGGAGCTTGGATGTTTTAAAGGAAATGAAAAGCTGAAAGGTGACTATGACAACGAAGATCTGGAGGTTAATGGAGGCAAATTAAGGATTCATAGGAAGAACTCCTCCCCTGAAAGTGGAGGTAGCAAATATAGGGCCAGGGAAAGCTCACCTAATTATAGGTGTAGGAGTCGATCCAGATCAAGTGGTCATACTCATAGTGTAATAGAAGAATATGCTCATTCCAGGAGGAGGAATGACGAGGAAAGAATTGGGGAATATGGCAGGGAGCGTGGACATGTGAGTAGGGATTTGGTGGCAGGTGATAGAAGGGAGCACAGTTCCAGCTATTACAGTCGGGAGGCCCGAGATAGAGATAGGAGCAAGGACAGGGATGGGGATAGGGACCTAAGAAGAGAAAAGGAACGGGAAAGGAGCCGGAATAGGGAGGATGATCGTGTGCATAGGAGGGGAAAAGAACGTGAAAGGAGTCATGAGAAGGATAGAAGGGATGTGGAAAAAGATAGGAGCTGGGGAAGAGAGGTGGACAGGGATAGACGAAGAGAAAAGGAGCGAGATAGAGAGAGGAGCTGGGAGATTGTGGCTGAGCGGCATAGAAGTGATAGGGGACGAGAGAGGAGTAGGGACAGAGGAAGGGTTGGGGAGAGAGATAGAGTTCGTGAGAGTGAAAGGGATGATAAACATCGAGAAAGAGATAAGATTAGGGAGAGGGAGAGGCGTAAGGATAGAAATGTTCTTGATAAAGATAAAAATCTGGGTTATGAGCATGGTAATGAGAGCCGGGACGGAGATATGCGCCGTAAGCATTTGAGACATGAAGAAGCAGAAAGCCATAGGGAGAAAAAAAGAAATTCTGAGTCTGTGACAGTTGATAAACCTGTGGACAGGGGTGAGGATGAACAAGATGACCTGGATGAGACGGTTACGTTGCCATTTGCAGAACAAGAAGAGGAAGACCTCAATAGAATTAAGGAGGAGAGTAGAAGGAGGAGGGAAGCAATCTTAGAGAAATATAAAAAGCAGCAACCACAGCAGCATCAACATGAAGAACAAACTTCTGAAAATAAAGAAAAAGATAAGGATCCTGTGAATGTTCCGGCTACTGTTTCTGAAGCTCCTGATGCTAAGAACGATGGTGCTGATGTTTTTGAAACGGAACCATCTTTTGCTGTTGGTAAATCTCCCCGAGAAAATGGAAATGATGCATCTGAAAAGATCCCTGGTGTTGCTGGGGGCTTGGGAGAGGGTTCACCAAAGAGTGAAAGATCCGATGACCAGTTTTGTGATGACATATTTGGTGAGACACCAACAGGAGTTCGCAAATCAGGCAAAGGGGATGGATTGCGTGTTGACAGGGGTGGATTGCATGACAATTGGGATGATGCAGAGGGGTATTACAGTTATCGTTTTGGTGAAATACTTGATGGTCGATATGAAGTCACAGCAGCTCATGGTAAAGGTGTCTTTTCAACAGTTGTTCGTGCAAAGAATCTAAAAGCTGGTAATGGTGAGCCAGAAGAAGTAGCTATAAAAATTATTCGTAATAATGACACCATGTACAAGGCTGGTATGGATGAGTTGGTCATACTAAAGAAATTAAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCGTACGCGAAACAACTCTTTATTGCATTGAAGCATCTTCGGAACTGTGGTGTTCTCCATTGTGATATAAAGCCAGACAATATGTTGGTGAATGAAGCAAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCTATGTTTGCTGGAAAGAATGAAGTCACACCATACCTTGTGAGTCGCTTTTATCGTGCCCCTGAAATAATACTTGGCTTGTCATATGATCATCCGTTAGATATTTGGTCTGTTGGATGTTGTTTGTACGAACTTTATACTGGAAAAGTTCTTTTCCCAGGTGGTACTAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGTGCTTTTCCGAAGAAGATGCTTCGTAAGGGAGCATTTATTGATCAGCATTTTGACCAGGACTTGAATTTTCTTGCTACAGAAGAGGATCCAGTGACGAGAAAGGCTATAAAGCGGTTGATTCTCAACATGAAGCCCAAAGACATTGGAACTATCATTGCTGGCTCTCCTGGAGAGGATCCGAAGATGTTAGCTAATTTCAAAGATCTTCTGGACAAGGTTTTTGTCCTGGATCCGGAGAAGAGGTTGACAGTCTCACAAGCATTAAGCCATCCATTCATCACTGGCAAGTGA 2955 0.4528 MASDAHGSRHKHRRSSSPEEVERSSKRHKHRHHGHRHHRHRHASRKHEEEHELDAETVNKVPSPTLGPESDRPDDDVEEGEILEEEGPGGRDGEIGKKHTESDAESGEIMATGGRGIRSDNSNPVPSTEEMLHGKDAIPSKEKVVTTAKGLETNSEDINNGRFISPRLDGEDDTRHQGHTGHSRNEVDGSPTHSSAESVDAKHARAISDGLGNGYLDRKSSKEDKWPHGELGCFKGNEKLKGDYDNEDLEVNGGKLRIHRKNSSPESGGSKYRARESSPNYRCRSRSRSSGHTHSVIEEYAHSRRRNDEERIGEYGRERGHVSRDLVAGDRREHSSSYYSREARDRDRSKDRDGDRDLRREKERERSRNREDDRVHRRGKERERSHEKDRRDVEKDRSWGREVDRDRRREKERDRERSWEIVAERHRSDRGRERSRDRGRVGERDRVRESERDDKHRERDKIRERERRKDRNVLDKDKNLGYEHGNESRDGDMRRKHLRHEEAESHREKKRNSESVTVDKPVDRGEDEQDDLDETVTLPFAEQEEEDLNRIKEESRRRREAILEKYKKQQPQQHQHEEQTSENKEKDKDPVNVPATVSEAPDAKNDGADVFETEPSFAVGKSPRENGNDASEKIPGVAGGLGEGSPKSERSDDQFCDDIFGETPTGVRKSGKGDGLRVDRGGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGKGVFSTVVRAKNLKAGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLSYDHPLDIWSVGCCLYELYTGKVLFPGGTNNDMLRLHMELKGAFPKKMLRKGAFIDQHFDQDLNFLATEEDPVTRKAIKRLILNMKPKDIGTIIAGSPGEDPKMLANFKDLLDKVFVLDPEKRLTVSQALSHPFITGK 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4907g00028 984 ProSiteProfiles Protein kinase domain profile. 706 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4907g00028 984 MobiDBLite consensus disorder prediction 216 266 - -
Pral4907g00028 984 Gene3D Phosphorylase Kinase; domain 1 677 762 - -
Pral4907g00028 984 MobiDBLite consensus disorder prediction 84 105 - -
Pral4907g00028 984 MobiDBLite consensus disorder prediction 147 161 - -
Pral4907g00028 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Pral4907g00028 984 PANTHER DUAL SPECIFICITY PROTEIN KINASE 765 982 - -
Pral4907g00028 984 SMART serkin_6 706 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4907g00028 984 MobiDBLite consensus disorder prediction 526 541 - -
Pral4907g00028 984 MobiDBLite consensus disorder prediction 166 183 - -
Pral4907g00028 984 MobiDBLite consensus disorder prediction 291 525 - -
Pral4907g00028 984 FunFam Serine/threonine-protein kinase PRP4 homolog 751 982 - -
Pral4907g00028 984 Gene3D Transferase(Phosphotransferase) domain 1 765 981 - -
Pral4907g00028 984 MobiDBLite consensus disorder prediction 1 652 - -
Pral4907g00028 984 Coils Coil 541 561 - -
Pral4907g00028 984 MobiDBLite consensus disorder prediction 543 592 - -
Pral4907g00028 984 MobiDBLite consensus disorder prediction 26 44 - -
Pral4907g00028 984 SUPERFAMILY Protein kinase-like (PK-like) 693 983 IPR011009 -
Pral4907g00028 984 FunFam serine/threonine-protein kinase PRP4 homolog 677 764 - -
Pral4907g00028 984 Pfam Protein kinase domain 772 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4907g00028 Pral-Chr4907 245325 253264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4907g00028 774 983 MAP Kinase Gene Family AT2G18170 35.047 2.08e-26 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pral4907g00028 Pkinase 1.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4907g00028 K08827 - gmx:100776908 1015.76