Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4907g00026 ATGGCCTCCGATGCACATGGCTCCCGTCACAAGCACCGGCGCTCATCTTCTCCCGAAGAAGTCGAGCGATCCTCTAAACGTCACAAGCACCGCCACCATGGCCACCGCCATCATCGGCACCGCCACGCTAGCAGGAAACACGAAGAGGAGCATGAACTCGATGCCGAAACTGTTAATAAGGTTCCTTCCCCAACTCTTGGTCCTGAGTCTGACAGGCCTGATGATGATGTGGAGGAGGGGGAGATTCTTGAAGAGGAGGGTCCCGGTGGCCGAGATGGTGAGATTGGAAAAAAGCATACGGAGTCCGATGCTGAGTCTGGTGAAATCATGGCCACGGGAGGTCGAGGTATTCGATCCGATAATTCAAATCCGGTACCTTCCACCGAAGAGATGTTGCATGGGAAGGACGCCATTCCCTCTAAAGAGAAAGTAGTGACTACTGCTAAAGGTTTAGAAACTAATAGTGAGGATATCAACAATGGTAGATTTATTAGTCCACGATTGGATGGAGAAGATGATACTCGCCATCAGGGACACACTGGTCACAGTAGAAATGAAGTTGATGGTTCTCCTACTCATTCAAGTGCGGAGTCCGTAGATGCTAAGCATGCTAGAGCTATTTCGGATGGTTTGGGCAATGGGTATTTGGATCGTAAATCTTCCAAAGAGGATAAATGGCCGCATGGGGAGCTTGGATGTTTTAAAGGAAATGAAAAGCTGAAAGGTGACTATGACAACGAAGATCTGGAGGTTAATGGAGGCAAATTAAGGATTCATAGGAAGAACTCCTCCCCTGAAAGTGGAGGTAGCAAATATAGGGCCAGGGAAAGCTCACCTAATTATAGGTGTAGGAGTCGATCCAGATCAAGTGGTCATACTCATAGTGTAATAGAAGAATATGCTCATTCCAGGAGGAGGAATGACGAGGAAAGAATTGGGGAATATGGCAGGGAGCGTGGACATGTGAGTAGGGATTTGGTGGCAGGTGATAGAAGGGAGCACAGTTCCAGCTATTACAGTCGGGAGGCCCGAGATAGAGATAGGAGCAAGGACAGGGATGGGGATAGGGACCTAAGAAGAGAAAAGGAACGGGAAAGGAGCCGGAATAGGGAGGATGATCGTGTGCATAGGAGGGGAAAAGAACGTGAAAGGAGTCATGAGAAGGATAGAAGGGATGTGGAAAAAGATAGGAGCTGGGGAAGAGAGGTGGACAGGGATAGACGAAGAGAAAAGGAGCGAGATAGAGAGAGGAGCTGGGAGATTGTGGCTGAGCGGCATAGAAGTGATAGGGGACGAGAGAGGAGTAGGGACAGAGGAAGGGTTGGGGAGAGAGATAGAGTTCGTGAGAGTGAAAGGGATGATAAACATCGAGAAAGAGATAAGATTAGGGAGAGGGAGAGGCGTAAGGATAGAAATGTTCTTGATAAAGATAAAAATCTGGGTTATGAGCATGGTAATGAGAGCCGGGACGGAGATATGCGCCGTAAGCATTTGAGACATGAAGAAGCAGAAAGCCATAGGGAGAAAAAAAGAAATTCTGAGTCTGTGACAGTTGATAAACCTGTGGACAGGGGTGAGGATGAACAAGATGACCTGGATGAGACGGTTACGTTGCCATTTGCAGAACAAGAAGAGGAAGACCTCAATAGAATTAAGGAGGAGAGTAGAAGGAGGAGGGAAGCAATCTTAGAGAAATATAAAAAGCAGCAACCACAGCAGCATCAACATGAAGAACAAACTTCTGAAAATAAAGAAAAAGATAAGGATCCTGTGAATGTTCCGGCTACTGTTTCTGAAGCTCCTGATGCTAAGAACGATGGTGCTGATGTTTTTGAAACGGAACCATCTTTTGCTGTTGGTAAATCTCCCCGAGAAAATGGAAATGATGCATCTGAAAAGATCCCTGGTGTTGCTGGGGGCTTGGGAGAGGGTTCACCAAAGAGTGAAAGATCCGATGACCAGTTTTGTGATGACATATTTGGTGAGACACCAACAGGAGTTCGCAAATCAGGCAAAGGGGATGGATTGCGTGTTGACAGGGGTGGATTGCATGACAATTGGGATGATGCAGAGGGGTATTACAGTTATCGTTTTGGTGAAATACTTGATGGTCGATATGAAGTCACAGCAGCTCATGGTAAAGGTGTCTTTTCAACAGTTGTTCGTGCAAAGAATCTAAAAGCTGGTAATGGTGAGCCAGAAGAAGTAGCTATAAAAATTATTCGTAATAATGACACCATGTACAAGGCTGGTATGGATGAGTTGGTCATACTAAAGAAATTAGTAGGTTCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTCATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCGTACGCGAAACAACTCTTTATTGCATTGAAGCATCTTCGGAACTGTGGTGTTCTCCATTGTGATATAAAGCCAGACAATATGTTGGTGAATGAAGCAAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCTATGTTTGCTGGAAAGAATGAAGTCACACCATACCTTGTGAGTCGCTTTTATCGTGCCCCTGAAATAATACTTGGCTTGTCATATGATCATCCGTTAGATATTTGGTCTGTTGGATGTTGTTTGTACGAACTTTATACTGGAAAAGTTCTTTTCCCAGGTGGTACTAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGTGCTTTTCCGAAGAAGATGCTTCGTAAGGGAGCATTTATTGATCAGCATTTTGACCAGGACTTGAATTTTCTTGCTACAGAAGAGGATCCAGTGACGAGAAAGGCTATAAAGCGGTTGATTCTCAACATGAAGCCCAAAGACATTGGAACTATCATTGCTGGCTCTCCTGGAGAGGATCCGAAGATGTTAGCTAATTTCAAAGATCTTCTGGACAAGGTTTTTGTCCTGGATCCGGAGAAGAGGTTGACAGTCTCACAAGCATTAAGCCATCCATTCATCACTGGCAAGTGA 3075 0.4491 MASDAHGSRHKHRRSSSPEEVERSSKRHKHRHHGHRHHRHRHASRKHEEEHELDAETVNKVPSPTLGPESDRPDDDVEEGEILEEEGPGGRDGEIGKKHTESDAESGEIMATGGRGIRSDNSNPVPSTEEMLHGKDAIPSKEKVVTTAKGLETNSEDINNGRFISPRLDGEDDTRHQGHTGHSRNEVDGSPTHSSAESVDAKHARAISDGLGNGYLDRKSSKEDKWPHGELGCFKGNEKLKGDYDNEDLEVNGGKLRIHRKNSSPESGGSKYRARESSPNYRCRSRSRSSGHTHSVIEEYAHSRRRNDEERIGEYGRERGHVSRDLVAGDRREHSSSYYSREARDRDRSKDRDGDRDLRREKERERSRNREDDRVHRRGKERERSHEKDRRDVEKDRSWGREVDRDRRREKERDRERSWEIVAERHRSDRGRERSRDRGRVGERDRVRESERDDKHRERDKIRERERRKDRNVLDKDKNLGYEHGNESRDGDMRRKHLRHEEAESHREKKRNSESVTVDKPVDRGEDEQDDLDETVTLPFAEQEEEDLNRIKEESRRRREAILEKYKKQQPQQHQHEEQTSENKEKDKDPVNVPATVSEAPDAKNDGADVFETEPSFAVGKSPRENGNDASEKIPGVAGGLGEGSPKSERSDDQFCDDIFGETPTGVRKSGKGDGLRVDRGGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGKGVFSTVVRAKNLKAGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGSDPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLSYDHPLDIWSVGCCLYELYTGKVLFPGGTNNDMLRLHMELKGAFPKKMLRKGAFIDQHFDQDLNFLATEEDPVTRKAIKRLILNMKPKDIGTIIAGSPGEDPKMLANFKDLLDKVFVLDPEKRLTVSQALSHPFITGK 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4907g00026 1024 ProSiteProfiles Protein kinase domain profile. 706 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4907g00026 1024 CDD STKc_PRP4 705 1021 IPR044092 GO:0004674|GO:0006468|GO:0045292
Pral4907g00026 1024 MobiDBLite consensus disorder prediction 526 541 - -
Pral4907g00026 1024 FunFam Serine/threonine-protein kinase PRP4 homolog 766 1022 - -
Pral4907g00026 1024 MobiDBLite consensus disorder prediction 291 525 - -
Pral4907g00026 1024 PANTHER DUAL SPECIFICITY PROTEIN KINASE 401 1022 - -
Pral4907g00026 1024 MobiDBLite consensus disorder prediction 543 592 - -
Pral4907g00026 1024 MobiDBLite consensus disorder prediction 26 44 - -
Pral4907g00026 1024 Pfam Protein kinase domain 708 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4907g00026 1024 FunFam serine/threonine-protein kinase PRP4 homolog 677 765 - -
Pral4907g00026 1024 MobiDBLite consensus disorder prediction 216 266 - -
Pral4907g00026 1024 Gene3D Phosphorylase Kinase; domain 1 677 765 - -
Pral4907g00026 1024 MobiDBLite consensus disorder prediction 84 105 - -
Pral4907g00026 1024 MobiDBLite consensus disorder prediction 147 161 - -
Pral4907g00026 1024 SMART serkin_6 706 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4907g00026 1024 MobiDBLite consensus disorder prediction 166 183 - -
Pral4907g00026 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Pral4907g00026 1024 SUPERFAMILY Protein kinase-like (PK-like) 693 1023 IPR011009 -
Pral4907g00026 1024 MobiDBLite consensus disorder prediction 1 652 - -
Pral4907g00026 1024 Coils Coil 541 561 - -
Pral4907g00026 1024 Gene3D Transferase(Phosphotransferase) domain 1 766 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4907g00026 Pral-Chr4907 245047 253265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4907g00026 713 1021 MAP Kinase Gene Family AT4G01370 33.121 2.94e-28 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pral4907g00026 Pkinase 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4907g00026 K08827 - gmx:100776908 1113.6