Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4907g00008 | ATGTCTCATTCTGCAATAGGCCTTGGCTTTTATTCCTCCTCTTCATCTCCGGCGACGTCGTACGCCACTTCGCCGGTGATCATAGCTTTCACGCTCGGCGTCCTCATATGTTTCATCATAGGTTTCTGCTTCATCTACTTGTGTCGATGTTGCTTCGTGAGTCTCCTCTATTCCTGGGCATTGCATCGTCCCACCGCCGAAAACTTCGTCCACCAGATTCATTCCCCCACCGGCGCAGCGTCTCCGATCCGAGGCCTCGACCCGGCGCTTCTTCAAATCTTCCCAACCTTCCCATACGCCTCCGTGAAGGAGATCCAAGGGAAGAATAACAAAAGCTATAGCCTAGAATGCGCCATTTGCTTGTTAGAATTCGAGGAGGATAGCTTCCTTCGCCTCTTGACCGTTTGCTGCCATGTCTTTCACCAAGAATGTATCGATCTCTGGCTCGAATCTCACAAGACATGCCCTGTTTGTCGCATAGATCTCGATTCTTCGTCAAAGGAAAAACGCCCGGAAAACCAGACAAGAATAGAGCCCTTAACAGAGAATAATCACAACAACAACGAGACCCTGAAATGGCCAGACTTTGTAGTAAATGTTGCTATGCTGAAGCCATATCAGGCTGCACTACTACTTCCTGCGAGCCTTTAA | 651 | 0.4916 | MSHSAIGLGFYSSSSSPATSYATSPVIIAFTLGVLICFIIGFCFIYLCRCCFVSLLYSWALHRPTAENFVHQIHSPTGAASPIRGLDPALLQIFPTFPYASVKEIQGKNNKSYSLECAICLLEFEEDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRIDLDSSSKEKRPENQTRIEPLTENNHNNNETLKWPDFVVNVAMLKPYQAALLLPASL | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4907g00008 | 216 | FunFam | E3 ubiquitin-protein ligase ATL6 | 75 | 165 | - | - | |
Pral4907g00008 | 216 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 97 | 167 | IPR013083 | - | |
Pral4907g00008 | 216 | PANTHER | RING FINGER DOMAIN-CONTAINING | 19 | 162 | - | - | |
Pral4907g00008 | 216 | SUPERFAMILY | RING/U-box | 116 | 164 | - | - | |
Pral4907g00008 | 216 | SMART | ring_2 | 117 | 158 | IPR001841 | - | |
Pral4907g00008 | 216 | Pfam | Ring finger domain | 116 | 159 | IPR001841 | - | |
Pral4907g00008 | 216 | ProSiteProfiles | Zinc finger RING-type profile. | 117 | 159 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4907g00008 | Pral-Chr4907 | 141597 | 142512 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4907g00008 | 12 | 163 | C3H Transcription Factor Family | AT2G35420 | 39.355 | 1.04e-28 | 106 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4907g00008 | - | - | pcin:129322653 | 298.901 |