Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4907g00008 ATGTCTCATTCTGCAATAGGCCTTGGCTTTTATTCCTCCTCTTCATCTCCGGCGACGTCGTACGCCACTTCGCCGGTGATCATAGCTTTCACGCTCGGCGTCCTCATATGTTTCATCATAGGTTTCTGCTTCATCTACTTGTGTCGATGTTGCTTCGTGAGTCTCCTCTATTCCTGGGCATTGCATCGTCCCACCGCCGAAAACTTCGTCCACCAGATTCATTCCCCCACCGGCGCAGCGTCTCCGATCCGAGGCCTCGACCCGGCGCTTCTTCAAATCTTCCCAACCTTCCCATACGCCTCCGTGAAGGAGATCCAAGGGAAGAATAACAAAAGCTATAGCCTAGAATGCGCCATTTGCTTGTTAGAATTCGAGGAGGATAGCTTCCTTCGCCTCTTGACCGTTTGCTGCCATGTCTTTCACCAAGAATGTATCGATCTCTGGCTCGAATCTCACAAGACATGCCCTGTTTGTCGCATAGATCTCGATTCTTCGTCAAAGGAAAAACGCCCGGAAAACCAGACAAGAATAGAGCCCTTAACAGAGAATAATCACAACAACAACGAGACCCTGAAATGGCCAGACTTTGTAGTAAATGTTGCTATGCTGAAGCCATATCAGGCTGCACTACTACTTCCTGCGAGCCTTTAA 651 0.4916 MSHSAIGLGFYSSSSSPATSYATSPVIIAFTLGVLICFIIGFCFIYLCRCCFVSLLYSWALHRPTAENFVHQIHSPTGAASPIRGLDPALLQIFPTFPYASVKEIQGKNNKSYSLECAICLLEFEEDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRIDLDSSSKEKRPENQTRIEPLTENNHNNNETLKWPDFVVNVAMLKPYQAALLLPASL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4907g00008 216 FunFam E3 ubiquitin-protein ligase ATL6 75 165 - -
Pral4907g00008 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 167 IPR013083 -
Pral4907g00008 216 PANTHER RING FINGER DOMAIN-CONTAINING 19 162 - -
Pral4907g00008 216 SUPERFAMILY RING/U-box 116 164 - -
Pral4907g00008 216 SMART ring_2 117 158 IPR001841 -
Pral4907g00008 216 Pfam Ring finger domain 116 159 IPR001841 -
Pral4907g00008 216 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4907g00008 Pral-Chr4907 141597 142512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4907g00008 12 163 C3H Transcription Factor Family AT2G35420 39.355 1.04e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4907g00008 - - pcin:129322653 298.901