Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4906g00004 ATGCAGCGTCAGAAAATGGGGTTTCCAGAATACATCGAAGCGTTGGAAGAAGAACGCTTGAAAATTCAGATGTTCGCTAAAGAACTTCCGCTTTCACTGGAGCTTGTCTCGCAAGCCATTGAAGCTTGTAGGCAACAAGTTTCTGGAACCACGGAGTACAATTTTCATGGACAATCGGATTGTTCGGAGCAGACGTCAATGGAAGAAGGCCCTGTGCTCGAAGAGTTTATTCCCATCAAGAAAAGGCCTTCCCCTGATTGTGACGACGAAGACGACGAAGACGAACAACATTCGCATAAGCCCAAGATTCTCAAGGACGACAATAAGAGCTCTGATAAGAGAAAATCCGACTGGCTCAGATCCGTTCAGCTCTGGAACCCAGATCCCCCAACTAAAGAGGATTTGCCCAGACAAGCTACGGTGGTGGAAGTGAAGAGAAATGGAGGCGCCTTCCAGCCATTTCAGAGAGAAGACAATGTTGCAAAGACGAACTATAACGAGACATCGGCCGGTAAATCTGCATCTCCGGCTCCCGTGGCTGCAATGAGCTCCACCGCCGGTGCCGTCACCAACGGAGGCGGAAACAAGAGATCGGAGGAGAAAGATGGGCAGGGTCAGAGGAAGCAACGGCGGTGCTGGTCACCTGAATTACACAAACGCTTCTTACAGGCCCTTCAACAGCTAGGCGGTCCAGATTCTGCAACTCCCAAGCAGATCAGAGAGCTCATGAAGGTCGATGGCCTCACAAACGATGAAGTCAAAAGCCACTTGCAGAAATTTCGGTTGCACACAAGAAGACCGAGTCCTATGATTCACAACAATGCTACTTCACAAACAGCTCCTTTTGTTCTTGTGGGGAATATTTTTGTGCAACCACCGGAATATGCGGCGGCAGTGGCAACTTCCACAGCATCAGGTGAGGTAACTACGGTGACCACACCCACCGGAATTTATGCGCCGGTGGCGGCACATCCTCCTATGCCGCCGCCACTTGGTAAGAAGGCGCAGGTGAAGCAATTGGAGCAGGGTGAGCAGTCACAGCATTCAGATGAAGAAGAAAGGGTGAATCACGGTAGTGAAGGAGCTGTTCATTCAAATTCTTCTCCTGATTCATCATCTTCCACACATACAACCTCTCATTCTCACGGATATTGA 1155 0.497 MQRQKMGFPEYIEALEEERLKIQMFAKELPLSLELVSQAIEACRQQVSGTTEYNFHGQSDCSEQTSMEEGPVLEEFIPIKKRPSPDCDDEDDEDEQHSHKPKILKDDNKSSDKRKSDWLRSVQLWNPDPPTKEDLPRQATVVEVKRNGGAFQPFQREDNVAKTNYNETSAGKSASPAPVAAMSSTAGAVTNGGGNKRSEEKDGQGQRKQRRCWSPELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRPSPMIHNNATSQTAPFVLVGNIFVQPPEYAAAVATSTASGEVTTVTTPTGIYAPVAAHPPMPPPLGKKAQVKQLEQGEQSQHSDEEERVNHGSEGAVHSNSSPDSSSSTHTTSHSHGY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4906g00004 384 MobiDBLite consensus disorder prediction 360 384 - -
Pral4906g00004 384 MobiDBLite consensus disorder prediction 167 192 - -
Pral4906g00004 384 Gene3D - 207 265 - -
Pral4906g00004 384 NCBIfam myb-like DNA-binding domain, SHAQKYF class 208 263 IPR006447 GO:0003677
Pral4906g00004 384 FunFam Myb family transcription factor 207 265 - -
Pral4906g00004 384 MobiDBLite consensus disorder prediction 319 384 - -
Pral4906g00004 384 SUPERFAMILY Homeodomain-like 206 266 IPR009057 -
Pral4906g00004 384 Pfam Myb-like DNA-binding domain 210 259 IPR001005 -
Pral4906g00004 384 MobiDBLite consensus disorder prediction 76 137 - -
Pral4906g00004 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 205 265 IPR017930 -
Pral4906g00004 384 MobiDBLite consensus disorder prediction 195 213 - -
Pral4906g00004 384 MobiDBLite consensus disorder prediction 167 213 - -
Pral4906g00004 384 MobiDBLite consensus disorder prediction 94 119 - -
Pral4906g00004 384 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 349 IPR044787 GO:0003700|GO:0006355
Pral4906g00004 384 MobiDBLite consensus disorder prediction 344 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4906g00004 Pral-Chr4906 25813 27787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4906g00004 2 296 G2-like Transcription Factor Family AT1G13300 48.829 4.13e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4906g00004 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4906g00004 - - qsa:O6P43_032783 432.565