Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4904g00001 ATGGAGATCGAGGCGAGCAGGGCGGTTGGGAATAATGGAACGTCGGCGATTCCGGCGCTGAGTCCACTCAGCGAGACGCTGTGGAGGGAGACGAAGGCCAACGTCGACTTCGTCGGAGATGTGTCGGCTAGGCTCACCTGGAAGGATCTCACCGTTATGGTCACTCTTGGTAACGGAGAGACCCAGAACGTGCTGGAAGGACTCACCGGCTACGCCGAGCCCGGAACCTTCACCGCCCTCATGGGCCCCTCCGGCTCCGGCAAGTCCACTCTCCTCGACGCCCTCTCTAGCCGTCTCGCTGCTAATGCCTTCCTCTCCGGAACCATCCTCCTCAACGGTCGCAAAGCCAAGCTCTCTTTCGGCACTGCAGCATATGTGACACAAGACGACAACCTCATTGGAACTTTGACTGTACGAGAAACCATATCATACTCGGCTCGTCTGAGGCTGCCGGATAAGATGCCGTGGTCGGACAAGCGAGCTCTGGTGGAGAGCACAATAATAGCCATGGGGCTTCAGGATTGTGCCGACACGGTGATCGGGAACTGGCATCTCCGGGGGATCAGTGGGGGAGAGAAAAGAAGAGTTAGCATCGCTTTGGAGATCTTGATGAGGCCCAGGCTGCTCTTTCTTGATGAACCTACCAGTGGACTCGACAGTGCTTCAGCTTTCTTTGTGACTCAAACACTACGAGCCCTCGCAAGGGATGGTCGAACTGTGATAGCTTCAATTCACCAACCTAGCAGTGAAGTCTTTGAACTATTTGACCAATTGTACCTTCTTTCTGGCGGCAAAACTGTTTACTTTGGCCAAGCTTCTGAAGCTTACGAGTTCTTTGCACAAGCTGGCTTTCCATGCCCTGCTTTGAGGAACCCTTCTGATCATTTCCTTAGATGCATCAACTCTGACTTTGACAAAGTCAAGGCCACTCTCAAGGGGTCCATGAAACTCAGGTTTGAAGGAAGTGATGATCCTCTGGACAAGATAACTACGGCTGAAGCTATCCGGACTCTCATAGATTATTATCGGACTTCTCAGTACTCTTATGCTGCAATACAGAAAGTGGATGAGATATCCAAAGTGAAAGGAACGGTGCTGGATTCTGGAGGAAGTCAGGCCAGTTTCTTCATGCAGGCTTTTACACTAACCAAGAGATCCTTCATCAACATGTCAAGGGATTTTGGATACTACTGGCTTCGTCTTGTCATCTACATTGTTGTCACTATCTGCATTGGAACCATCTATCTGAACGTTGGAACTGGCTACAACTCCATTCTGGCAAGAGGTTCATGTGCATCGTTTGTGTTTGGGTTTGTGACTTTCATGTCAATTGGTGGGTTTCCTTCGTTTGTTGAAGACATGAAGGTTTTTCAAAGGGAGAGGCTGAATGGGCATTATGGAGTGGTATCGTTTGTGATAAGCAACACATTATCTGCAATGCCGTTTCTGATACTGATAACGTTTCTGTCTGGCACCATTTGTTACTTCATGGTTCGTCTCCATCCTGGCTTCTGGCACTATCTCTTCTTCGTCTTGTGCCTCTATGCCAGTGTTACTGTGGTTGAGAGCTTGATGATGGCCATTGCCAGTATTGTCCCCAACTTCCTTATGGGCATCATCATTGGCGCTGGTATTCAGGGCATATTCATGTTGGTGTCTGGCTACTTCAGGCTCCCACACGACATACCAAAGCCATTCTGGCGCTACCCAATGTCTTATATCAGTTTCCACTTCTGGGCATTGCAGGGTCAATACCAAAATGATCTGAAAGGATTGATCTTCGACAACCAGACGCCGGATCTTCCCAAGATTCCGGGAGAGTACATCCTGGAGAATGTGTTCCAGATTGACGTAAACAGATCAAAGTGGATTGATCTGCTAGTGATATTCAGCATGATCATCATATACCGCATCATCTTCTTCATCATGATCAAGATCAACGAGGATGTGACTCCGTGGGTGAGGGGTTACATAGCCAGGAGAAGAATGCAGCAGAAGAGCGTAACCCAGAACACCACCATCGCTCCTGATGTTCTCACCCAATCTCCCTCTCTACGAACCTATATCACAAGCCAATCCAGTGGTGCTTCTAGGAAAAGATAG 2103 0.4907 MEIEASRAVGNNGTSAIPALSPLSETLWRETKANVDFVGDVSARLTWKDLTVMVTLGNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWSDKRALVESTIIAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDKITTAEAIRTLIDYYRTSQYSYAAIQKVDEISKVKGTVLDSGGSQASFFMQAFTLTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVVSFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLKGLIFDNQTPDLPKIPGEYILENVFQIDVNRSKWIDLLVIFSMIIIYRIIFFIMIKINEDVTPWVRGYIARRRMQQKSVTQNTTIAPDVLTQSPSLRTYITSQSSGASRKR 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4904g00001 700 Pfam ABC-2 type transporter 378 584 IPR013525 GO:0016020|GO:0140359
Pral4904g00001 700 SMART AAA_5 74 245 IPR003593 GO:0016887
Pral4904g00001 700 FunFam ABC transporter G family member 11 39 282 - -
Pral4904g00001 700 Pfam ABC transporter 67 216 IPR003439 GO:0005524
Pral4904g00001 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 282 IPR027417 -
Pral4904g00001 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 288 IPR003439 GO:0005524
Pral4904g00001 700 Gene3D - 39 283 IPR027417 -
Pral4904g00001 700 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524|GO:0016887
Pral4904g00001 700 CDD ABCG_EPDR 42 270 - -
Pral4904g00001 700 Pfam ABC-2 type transporter 245 301 IPR043926 GO:0140359
Pral4904g00001 700 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 32 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4904g00001 Pral-Chr4904 2254 6557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4904g00001 75 249 Calmodulin-binding Proteins AT2G36910 33.333 1.95e-11 65.9