Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4903g00002 ATGGGAACGTCGGCGATTCCGGCGCTGAGTCCACTCAGCGAGACGCTGTGGAGGGAGACGAAGGCCAACGTCGACTTCGTCGGAGATGTGTCGGCTAGGCTCACCTGGAAGGATCTCACCGTTATGGTCACTCTTGGTAACGGAGAGACCCAGAACGTGCTGGAAGGACTCACCGGCTACGCCGAGCCCGGAACCTTCACCGCCCTCATGGGCCCCTCCGGCTCCGGCAAGTCCACTCTCCTCGACGCCCTCTCTAGCCGTCTCGCTGCTAATGCCTTCCTCTCCGGAACCATCCTCCTCAACGGTCGCAAAGCCAAGCTCTCTTTCGGCACTGCAGCATATGTGACACAAGACGACAACCTCATTGGAACTTTGACTGTACGAGAAACCATATCGTACTCGGCTCGTCTGAGGCTGCCGGATAAGATGCCGTGGTCGGACAAGCGAGCTCTGGTGGAGAGCACAATAATAGCCATGGGGCTTCAGGATTGTGCCGACACGGTGATCGGGAACTGGCATCTCCGGGGGATCAGTGGGGGAGAGAAAAGAAGAGTTAGCATCGCTTTGGAGATCTTGATGAGGCCCAGGCTGCTCTTTCTTGATGAACCTACCAGTGGACTCGACAGTGCTTCAGCTTTCTTTGTGACTCAAACACTACGAGCCCTCGCAAGGGATGGTCGAACTGTGATAGCTTCAATTCACCAACCTAGCAGTGAAGTCTTTGAACTATTTGACCAATTGTACCTTCTTTCTGGCGGCAAAACTGTTTACTTTGGCCAAGCTTCTGAAGCTTACGAGTTCTTTGCACAAGCTGGCTTTCCATGCCCTGCTTTGAGGAACCCTTCTGATCATTTCCTTAGATGCATCAACTCTGACTTTGACAAAGTCAAGGCCACTCTCAAGGGGTCCATGAAACTCAGGTTTGAAGGAAGTGATGATCCTCTGGACAAGATAACTACGGCTGAAGCTATCCGGACTCTCATAGATTATTATCGGACTTCTCAGTACTCTTATGCTGCAATACAGAAAGTGGATGAGATATCCAAAGTGAAAGGAACGGTGCTGGATTCTGGAGGAAGTCAGGCCAGTTTCTTCATGCAGGCTTTTACACTAACCAAGAGATCCTTCATCAACATGTCAAGGGATTTTGGATACTACTGGCTTCGTCTTGTCATCTACATTGTTGTCACTATCTGCATTGGAACCATCTATCTGAACGTTGGAACTGGCTACAACTCCATTCTGGCAAGAGGTTCATGTGCATCGTTTGTGTTTGGGTTTGTGACTTTCATGTCAATTGGTGGGTTTCCTTCGTTTGTTGAAGACATGAAGGTTTTTCAAAGGGAGAGGCTGAATGGGCATTATGGAGTGGTATCGTTTGTGATAAGCAACACATTATCTGCAATGCCGTTTCTGATACTGATAACGTTTCTGTGTGGCACCATTTGTTACTTCATGGTTCGTCTCCATCCTGGCTTCTGGCACTATCTCTTCTTCGTCTTGTGCCTCTATGCCAGTGTTACTGTGGTTGAGAGCTTGATGATGGCCATTGCCAGTATTGTCCCCAACTTCCTTATGGGCATCATCATTGGCGCTGGTATTCAGTATGGCATATTCATGTTGGTGTCTGGCTACTTCAGGCTCCCACACGACATACCAAAGCCATTCTGGCGCTACCCAATGTCTTATATCAGTTTCCACTTCTGGGCATTGCAGGGTCAATACCAAAATGATCTGAAAGGATTGATCTTCGACAACCAGACGCCGGATCTTCCCAAGATTCCGGGAGAGTACATCCTGGAGAATGTGTTCCAGATTGACGTAAACAGATCAAAGTGGATTGATCTGCTAGTGATATTCAGCATGATCATCATATACCGCATCATCTTCTTCATCATGATCAAGATCAACGAGGATGTGACTCCGTGGGTGAGGGGTTACATAGCCAGGAGAAGAATGCAGCAGAAGAGCGTAACCCAGAACACCACCATCGCTCCTGATGTTCTCACCCAATCTCCCTCTCTACGAACCTATATCACAAGCCAATCCAGTGGTGCTTCTAGGAAAAGATAG 2073 0.4891 MGTSAIPALSPLSETLWRETKANVDFVGDVSARLTWKDLTVMVTLGNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWSDKRALVESTIIAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDKITTAEAIRTLIDYYRTSQYSYAAIQKVDEISKVKGTVLDSGGSQASFFMQAFTLTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVVSFVISNTLSAMPFLILITFLCGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQYGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLKGLIFDNQTPDLPKIPGEYILENVFQIDVNRSKWIDLLVIFSMIIIYRIIFFIMIKINEDVTPWVRGYIARRRMQQKSVTQNTTIAPDVLTQSPSLRTYITSQSSGASRKR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4903g00002 690 Gene3D - 28 272 IPR027417 -
Pral4903g00002 690 SMART AAA_5 63 234 IPR003593 GO:0016887
Pral4903g00002 690 FunFam ABC transporter G family member 11 28 271 - -
Pral4903g00002 690 Pfam ABC transporter 56 205 IPR003439 GO:0005524
Pral4903g00002 690 CDD ABCG_EPDR 31 259 - -
Pral4903g00002 690 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 277 IPR003439 GO:0005524
Pral4903g00002 690 Pfam ABC-2 type transporter 234 290 IPR043926 GO:0140359
Pral4903g00002 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 271 IPR027417 -
Pral4903g00002 690 Pfam ABC-2 type transporter 367 574 IPR013525 GO:0016020|GO:0140359
Pral4903g00002 690 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 23 656 - -
Pral4903g00002 690 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4903g00002 Pral-Chr4903 23428 27551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4903g00002 64 265 Calmodulin-binding Proteins AT2G36910 31.455 1.63e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4903g00002 K05681 - gmx:100816389 1248.42