Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4901g00001 CAACCTATGAAATGGGCAATGCGACTTAGAGCTGCTTTGTACCTTGCCCAAGCTTTAGAATACTGTACCAACAGAGGACGCGATCTATATCATGATCTCAATGCTTATAGAGTTCTCTTTGATGTTGAGGGCAATCCTAGACTTTCATGCTTTGGTTTGATGAAAAACAGTCGAGATGGGAAAAGTTACAGTACAAATCTAGCATTTGCCCCTCCTGAGTATCTCAGAACAGGAAGAGTAACTCCAGAAACTGTAACATATAGTTTTGGCACCCTTTTGCTTGACCTTCTCAGTGGAAAACATATACCTCCGAGCCATGCACTTGACCTGGTTCGGGGAAGAAACCTTCAGATTCTTACAGACTCTTGTTTAGAAGGACAATTTTCAGTTTATGAGGGAACTGAGTTATTGCGCCTAGCATCACAATGTTTACAACCTGAACCGCATGAGCGTCCTTATCTCAAGTCATTGGCCCCTGCTTTGATACCCTTACAAAAGGAATCCAAGGTTCCTTCTCATGTGCTTATGGATATTCCCCATGGTGGTGCTGCTTTACCTCTGCCACCACTCAGTGAGGCTTGTCTTAAAATGGACTTGACTGCTATACACGAGATCATAGAAAAGATCGGGTATAAAGATGATGAAGGTGTTGCATATGAGCTTTCATTCCAAATTTGGACCAACCAAATGCAAGAAACATTGAACTTGAAGAATAAGGGTGATGCTGCATTTCGACGCAAGGATTTCAAAGCTGCAATTGATAGCTACACACAGTTCTCTGAAGTCGGAACCATGGTTTCTCCGACAGTTTATGCTCGCCGAAGTCTATCTTATCTCATGAGTGATATGCCTGAGGAAGCACTTGACGATGCATTGCAGGCACAAGCAATATCCCCTCTCTGGTACATTGCATTCCATTTGCAAGCTGCTGCTCTATTTGCACTGGGCAGGGAGGATGAGGCCCATGTGGCACTCAAAGAGGGTTCTGCACTTCATAATAAAAAGAATACAAATTAG 1017 0.4326 QPMKWAMRLRAALYLAQALEYCTNRGRDLYHDLNAYRVLFDVEGNPRLSCFGLMKNSRDGKSYSTNLAFAPPEYLRTGRVTPETVTYSFGTLLLDLLSGKHIPPSHALDLVRGRNLQILTDSCLEGQFSVYEGTELLRLASQCLQPEPHERPYLKSLAPALIPLQKESKVPSHVLMDIPHGGAALPLPPLSEACLKMDLTAIHEIIEKIGYKDDEGVAYELSFQIWTNQMQETLNLKNKGDAAFRRKDFKAAIDSYTQFSEVGTMVSPTVYARRSLSYLMSDMPEEALDDALQAQAISPLWYIAFHLQAAALFALGREDEAHVALKEGSALHNKKNTN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4901g00001 338 Gene3D Tetratricopeptide repeat domain 226 338 IPR011990 GO:0005515
Pral4901g00001 338 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 336 IPR045845 GO:0004672|GO:0009742
Pral4901g00001 338 FunFam probable serine/threonine-protein kinase At4g35230 231 338 - -
Pral4901g00001 338 Gene3D Transferase(Phosphotransferase) domain 1 1 178 - -
Pral4901g00001 338 SUPERFAMILY Protein kinase-like (PK-like) 2 165 IPR011009 -
Pral4901g00001 338 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4901g00001 338 Pfam Protein kinase domain 13 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4901g00001 338 FunFam probable serine/threonine-protein kinase At5g41260 1 178 - -
Pral4901g00001 338 SUPERFAMILY TPR-like 232 332 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4901g00001 Pral-Chr4901 4 4569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4901g00001 2 161 Glycoside Hydrolase AT3G07070 31.892 1.71e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pral4901g00001 Pkinase 1.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4901g00001 K14500 - qsa:O6P43_034239 538.495