Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4895g00030 ATGGGCGATAATATGCAGTTGCCGGGCTTCCGGTTTCACCCCACCGAAGAAGAACTCCTCGATTTCTATCTCAAGAATATGATCACCGGCAACCAGCTCTGCCTCGACATCATCCACTTCCTCAACATCTACCTCCATGATCCCTGGGATCTCCCCGCCATGGCCAAGGTCGGCGAGAGAGAGTGGTATTTCTTCGTGCCCAGAGACAAGAAGCAGGGAGGCGGCGGACGCCCCAACCGCACCACCCAGAAGGGCTTCTGGAAGGCCACCGGCTCCGACCGCAAGATCCTCAGCCACTCCCATCCGAAGCGCCTCATCGGCCTCCGCAAGACCCTCGTCTTCTACCAGGGAAGGGCTCCCCGCGGCTGCAAGACCGACTGGGTCATGAATGAGTACCGCCTCCCTGACACTCTCAACTTCCCCAACAAGGACGCCGTAGTTTTGTGCAAGATATACCGAAAGGCAACATCCTTGAAAGTGTTGGAGCAGAGGGCGTCGCTGTGCGAGTCCTCCTCGTCGTCCATGGCCACCAAGACGGAGAAAACGGAAGAAACCGTGGAGCTGGCGGCGGTGCCTAAGCTGAGCCTGCCGGAGCTGAAATTACCCATGAACACAGGGTGGAGCCAGGACCCGTCCTGGCCTCAAATAAACAGTCCTTGGCTCCAGTGTTTCACTCCTCTCACCATTTCCAACCTCTTAAATTGTTAA 708 0.5692 MGDNMQLPGFRFHPTEEELLDFYLKNMITGNQLCLDIIHFLNIYLHDPWDLPAMAKVGEREWYFFVPRDKKQGGGGRPNRTTQKGFWKATGSDRKILSHSHPKRLIGLRKTLVFYQGRAPRGCKTDWVMNEYRLPDTLNFPNKDAVVLCKIYRKATSLKVLEQRASLCESSSSSMATKTEKTEETVELAAVPKLSLPELKLPMNTGWSQDPSWPQINSPWLQCFTPLTISNLLNC 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4895g00030 235 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Pral4895g00030 235 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 180 - -
Pral4895g00030 235 SUPERFAMILY NAC domain 6 154 IPR036093 GO:0003677|GO:0006355
Pral4895g00030 235 ProSiteProfiles NAC domain profile. 6 154 IPR003441 GO:0003677|GO:0006355
Pral4895g00030 235 Pfam No apical meristem (NAM) protein 8 134 IPR003441 GO:0003677|GO:0006355
Pral4895g00030 235 FunFam NAC domain-containing protein 67-like 15 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4895g00030 Pral-Chr4895 177518 178796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4895g00030 1 228 NAC Transcription Factor Family AT2G17040 52.878 6.45e-93 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4895g00030 NAM 1.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4895g00030 - - pcin:129293873 378.252