Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4895g00021 ATGCTCATGGATCAGGCTGACGCCGGCAGAGTTCCTGCTGTGTCTTCAACGCCTCAAAGTCGGCAACAGAGTCACAAGTTCAGAGTGTACCGCGAGGTTCTTCGTCGCCTCAAGAACTCCAACAACGACGAGGCTATGCAGCCTGACTTCGACCATCAACTTTGGGGTCACTTCAACCGCCTCCCAACACGATATGCATTGGATGTTAATGTGGAAAGGGCAGCAGATGTCCTCACGCATAAGAGACTACTGCATTTGGCTCATGACCCTGCCAATAGGCCTGCAATTGAAGTTCGCCTAGTCCAGATTTATCCCATATCTGATGGAAATTCAGCTGACTCCATGCATTCAGATGTACCTAGGGAAGAAGCTTGTGAAACCTCTCCAAAGTACTCAAGGAGATTGAGTATTCACCCTCCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCACTTGAAGCTAATAAATCTGAATATGAGGAACACTCTGTGCATGGGAGTGCTAATCATTCTCAGCCCATGCATGAAATCACCTTTTCTACAGATGACAAGCCAAAGCTTCTCAGTCAGTTAACCTCTTTGCTGGCTGAAATTGGTTTAAACATCAGAGAGGCACACGCCTTTTCCACTACTGATGGCTACTCACTAGATGTGTTTGTTGTTGACGGATGGCCCTACGAGGAAACACAGCAGCTTAAAGCAGCTTTGGAGAAAGAAGTATTGTTGATTGAGAGGCAAGCATTTCCTACTCAGCAATCAGGGTTTTATGTCGGTAAGACTGATCAAGGGGAGATGAAATGTGAAGAAGGTCATTTGGTGATACCAAATGATGGGTCAGATGTTTGGGAGATAGAGCCTAAACATTTGAAATATGGAAATAAAATTGCATCTGGGTCATTTGGTGAACTGTTTAGAGGTACATATTGTAGTCAGGACGTGGCCATCAAGGTTCTCAAGGCAGAGAATGTAAGTTCAGATTGGAAGAAAGAGTTTGCCCAGGAAGTCTATATCATGAGAAAGGTTAGGCACAGGAATGTTGTGCAATTTATTGGAGCATGTACCAAGCCACCGCACTTTTGCATAATAACAGAGTTTATGAGTGGTGGAAGTGTGTATGACTATTTGCATAAGCAGAAGGGTGTTTTTAAATTTCCGTCCCTGCTCAGAGTAGCAATTGATGTTTCAAAGGGAATGAACTACTTGCACCAAAATAATATTATCCATAGAGATTTGAAGGCTGCTAATCTTTTGATGGATGAAAATCATGTTGTCAAGGTTGCTGATTTTGGTGTTGCTAGAGTGAAAGATCAATCCGGAGTCATGACAGCAGAAACTGGTACTTACCGGTGGATGGCACCTGAGGTTATAGAACACAAACCATATGATCAAAAGGCTGATGTGTTTAGTTTTGGAGTTGTTTTGTGGGAATTGCTCACTGGAAAGCTTCCATATGAATATCTGACCCCACTACAGGCTGCAATAGGAGTGGTTCAAAAGGGCCTCCGACCCACGATCCCCAAGAACACACATCCAAAATTTGTTGAGCTTCTTGAGAGGTGTTGGCGGCAAGATCCAACATTAAGACCTGATTTCTGTGCAATTATTGAGATCCTGCAGCAATTAGCTAACGAGATCGGAAATGATGGAGAGGATAGGCGGAGGGAGAAATCTGGAGGATTTTTTTCTGCCCTCAGAAGAGGTCATCACTGA 1716 0.4406 MLMDQADAGRVPAVSSTPQSRQQSHKFRVYREVLRRLKNSNNDEAMQPDFDHQLWGHFNRLPTRYALDVNVERAADVLTHKRLLHLAHDPANRPAIEVRLVQIYPISDGNSADSMHSDVPREEACETSPKYSRRLSIHPPPAFGSSPNLEALALEANKSEYEEHSVHGSANHSQPMHEITFSTDDKPKLLSQLTSLLAEIGLNIREAHAFSTTDGYSLDVFVVDGWPYEETQQLKAALEKEVLLIERQAFPTQQSGFYVGKTDQGEMKCEEGHLVIPNDGSDVWEIEPKHLKYGNKIASGSFGELFRGTYCSQDVAIKVLKAENVSSDWKKEFAQEVYIMRKVRHRNVVQFIGACTKPPHFCIITEFMSGGSVYDYLHKQKGVFKFPSLLRVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENHVVKVADFGVARVKDQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERCWRQDPTLRPDFCAIIEILQQLANEIGNDGEDRRREKSGGFFSALRRGHH 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4895g00021 571 Gene3D Transferase(Phosphotransferase) domain 1 370 560 - -
Pral4895g00021 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Pral4895g00021 571 SUPERFAMILY ACT-like 176 240 IPR045865 -
Pral4895g00021 571 SMART serkin_6 291 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4895g00021 571 FunFam serine/threonine-protein kinase HT1 370 560 - -
Pral4895g00021 571 Pfam Protein tyrosine and serine/threonine kinase 291 540 IPR001245 GO:0004672|GO:0006468
Pral4895g00021 571 ProSiteProfiles Protein kinase domain profile. 291 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4895g00021 571 PRINTS Tyrosine kinase catalytic domain signature 402 420 IPR001245 GO:0004672|GO:0006468
Pral4895g00021 571 PRINTS Tyrosine kinase catalytic domain signature 511 533 IPR001245 GO:0004672|GO:0006468
Pral4895g00021 571 PRINTS Tyrosine kinase catalytic domain signature 467 489 IPR001245 GO:0004672|GO:0006468
Pral4895g00021 571 PRINTS Tyrosine kinase catalytic domain signature 365 378 IPR001245 GO:0004672|GO:0006468
Pral4895g00021 571 PRINTS Tyrosine kinase catalytic domain signature 448 458 IPR001245 GO:0004672|GO:0006468
Pral4895g00021 571 SUPERFAMILY Protein kinase-like (PK-like) 280 539 IPR011009 -
Pral4895g00021 571 CDD ACT_TyrKc 176 243 - -
Pral4895g00021 571 CDD STKc_MAP3K-like 297 540 - -
Pral4895g00021 571 ProSiteProfiles ACT domain profile. 178 253 IPR002912 -
Pral4895g00021 571 Gene3D Phosphorylase Kinase; domain 1 281 369 - -
Pral4895g00021 571 Coils Coil 228 248 - -
Pral4895g00021 571 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 126 545 - -
Pral4895g00021 571 MobiDBLite consensus disorder prediction 1 25 - -
Pral4895g00021 571 FunFam Serine/threonine-protein kinase isoform 1 281 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4895g00021 Pral-Chr4895 109417 116464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4895g00021 4 570 MAP Kinase Kinase Kinase AT4G35780 62.937 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral4895g00021 PK_Tyr_Ser-Thr 5.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4895g00021 - - qsa:O6P43_002157 910.983