Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4895g00020 ATGCTCATGGATCAGGCTGACGCCGGCAGAGTTCCTGCTGTGTCTTCAACGCCTCAAAGTCGGCAACAGAGTCACAAGTTCAGAGTGTACCGCGAGGTTCTTCGTCGCCTCAAGAACTCCAACAACGACGAGGCTATGCAGCCTGACTTCGACCATCAACTTTGGGGTCACTTCAACCGCCTCCCAACACGGTCTCTACAATATGCATTGGATGTTAATGTGGAAAGGGCAGCAGATGTCCTCACGCATAAGAGACTACTGCATTTGGCTCATGACCCTGCCAATAGGCCTGCAATTGAAGTTCGCCTAGTCCAGATTTATCCCATATCTGATGGAAATTCAGCTGACTCCATGCATTCAGATGTACCTAGGGAAGAAGCTTGTGAAACCTCTCCAAAGTACTCAAGGAGATTGAGTATTCACCCTCCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCACTTGAAGCTAATAAATCTGAATATGAGGAACACTCTGTGCATGGGAGTGCTAATCATTCTCAGCCCATGCATGAAATCACCTTTTCTACAGATGACAAGCCAAAGCTTCTCAGTCAGTTAACCTCTTTGCTGGCTGAAATTGGTTTAAACATCAGAGAGGCACACGCCTTTTCCACTACTGATGGCTACTCACTAGATGTGTTTGTTGTTGACGGATGGCCCTACGAGGAAACACAGCAGCTTAAAGCAGCTTTGGAGAAAGAAGTATTGTTGATTGAGAGGCAAGCATTTCCTACTCAGCAATCAGGGTTTTATGTCGGTAAGACTGATCAAGGGGAGATGAAATGTGAAGAAGGTCATTTGGTGATACCAAATGATGGGTCAGATGTTTGGGAGATAGAGCCTAAACATTTGAAATATGGAAATAAAATTGCATCTGGGTCATTTGGTGAACTGTTTAGAGGTACATATTGTAGTCAGGACGTGGCCATCAAGGTTCTCAAGGCAGAGAATGTAAGTTCAGATTGGAAGAAAGAGTTTGCCCAGGAAGTCTATATCATGAGAAAGGTTAGGCACAGGAATGTTGTGCAATTTATTGGAGCATGTACCAAGCCACCGCACTTTTGCATAATAACAGAGTTTATGAGTGGTGGAAGTGTGTATGACTATTTGCATAAGCAGAAGGGTGTTTTTAAATTTCCGTCCCTGCTCAGAGTAGCAATTGATGTTTCAAAGGGAATGAACTACTTGCACCAAAATAATATTATCCATAGAGATTTGAAGGCTGCTAATCTTTTGATGGATGAAAATCATGTTGTCAAGGTTGCTGATTTTGGTGTTGCTAGAGTGAAAGATCAATCCGGAGTCATGACAGCAGAAACTGGTACTTACCGGTGGATGGCACCTGAGGTTATAGAACACAAACCATATGATCAAAAGGCTGATGTGTTTAGTTTTGGAGTTGTTTTGTGGGAATTGCTCACTGGAAAGCTTCCATATGAATATCTGACCCCACTACAGGCTGCAATAGGAGTGGTTCAAAAGGGCCTCCGACCCACGATCCCCAAGAACACACATCCAAAATTTGTTGAGCTTCTTGAGAGGTGTTGGCGGCAAGATCCAACATTAAGACCTGATTTCTGTGCAATTATTGAGATCCTGCAGCAATTAGCTAACGAGATCGGAAATGATGGAGAGGATAGGCGGAGGGAGAAATCTGGAGGATTTTTTTCTGCCCTCAGAAGAGGTCATCACTGA 1725 0.4406 MLMDQADAGRVPAVSSTPQSRQQSHKFRVYREVLRRLKNSNNDEAMQPDFDHQLWGHFNRLPTRSLQYALDVNVERAADVLTHKRLLHLAHDPANRPAIEVRLVQIYPISDGNSADSMHSDVPREEACETSPKYSRRLSIHPPPAFGSSPNLEALALEANKSEYEEHSVHGSANHSQPMHEITFSTDDKPKLLSQLTSLLAEIGLNIREAHAFSTTDGYSLDVFVVDGWPYEETQQLKAALEKEVLLIERQAFPTQQSGFYVGKTDQGEMKCEEGHLVIPNDGSDVWEIEPKHLKYGNKIASGSFGELFRGTYCSQDVAIKVLKAENVSSDWKKEFAQEVYIMRKVRHRNVVQFIGACTKPPHFCIITEFMSGGSVYDYLHKQKGVFKFPSLLRVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENHVVKVADFGVARVKDQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERCWRQDPTLRPDFCAIIEILQQLANEIGNDGEDRRREKSGGFFSALRRGHH 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4895g00020 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Pral4895g00020 574 Coils Coil 231 251 - -
Pral4895g00020 574 ProSiteProfiles Protein kinase domain profile. 294 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4895g00020 574 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 129 548 - -
Pral4895g00020 574 CDD ACT_TyrKc 179 246 - -
Pral4895g00020 574 FunFam Serine/threonine-protein kinase isoform 1 284 372 - -
Pral4895g00020 574 SUPERFAMILY Protein kinase-like (PK-like) 283 542 IPR011009 -
Pral4895g00020 574 Gene3D Phosphorylase Kinase; domain 1 284 372 - -
Pral4895g00020 574 PRINTS Tyrosine kinase catalytic domain signature 405 423 IPR001245 GO:0004672|GO:0006468
Pral4895g00020 574 PRINTS Tyrosine kinase catalytic domain signature 470 492 IPR001245 GO:0004672|GO:0006468
Pral4895g00020 574 PRINTS Tyrosine kinase catalytic domain signature 514 536 IPR001245 GO:0004672|GO:0006468
Pral4895g00020 574 PRINTS Tyrosine kinase catalytic domain signature 368 381 IPR001245 GO:0004672|GO:0006468
Pral4895g00020 574 PRINTS Tyrosine kinase catalytic domain signature 451 461 IPR001245 GO:0004672|GO:0006468
Pral4895g00020 574 ProSiteProfiles ACT domain profile. 181 256 IPR002912 -
Pral4895g00020 574 SMART serkin_6 294 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4895g00020 574 Gene3D Transferase(Phosphotransferase) domain 1 373 563 - -
Pral4895g00020 574 Pfam Protein tyrosine and serine/threonine kinase 294 543 IPR001245 GO:0004672|GO:0006468
Pral4895g00020 574 CDD STKc_MAP3K-like 300 543 - -
Pral4895g00020 574 SUPERFAMILY ACT-like 179 243 IPR045865 -
Pral4895g00020 574 FunFam serine/threonine-protein kinase HT1 373 563 - -
Pral4895g00020 574 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4895g00020 Pral-Chr4895 109417 116465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4895g00020 4 573 MAP Kinase Kinase Kinase AT4G35780 62.609 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral4895g00020 PK_Tyr_Ser-Thr 5.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4895g00020 - - qsa:O6P43_002157 905.59